RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 LGALS7P47929 136 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 ADTRPQ96IZ2 230 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 LY96Q9Y6Y9 160 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 IGF2RP11717 2491 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 J3QR06 171 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 CEACAM3P40198 252 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 PAXXQ9BUH6 204 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 PPIAL4EA0A075B759 164 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 PGPA6NDG6 321 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 NPIPB11E5RHQ5 1161 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 PPIAL4FP0DN26 164 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 DUTP33316 252 aaKnown RBP10.36□□□□□ -0.75
VAMP1-201ENST00000361716 RAB9AP51151 201 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 URB1-AS1Q96HZ7 61 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 TMSB15BA0A087X1C1 80 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 C9orf118A6NHY6 69 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 K7ERJ3 54 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 NDUFS8O00217 210 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 PEX7O00628 323 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 ENSAO43768 121 aaKnown RBP10.36□□□□□ -0.75
VAMP1-201ENST00000361716 NCR2O95944 276 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 SCGB2A2Q13296 93 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 UTF1Q5T230 341 aa10.36□□□□□ -0.75
VAMP1-201ENST00000361716 TEX50A0A1B0GTY4 177 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 A1L4Q6 167 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 WISP2O76076 250 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 P0C879 139 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 Q8TCH9 128 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 MBNL3Q9NUK0 354 aaKnown RBP10.35□□□□□ -0.75
VAMP1-201ENST00000361716 K7EP34 96 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 M0R1B8 84 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 TNFSF15O95150 251 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 COL8A1P27658 744 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 VDAC2P45880 294 aaPredicted RBP10.35□□□□□ -0.75
VAMP1-201ENST00000361716 OR10W1Q8NGF6 305 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 VSTM2AQ8TAG5 236 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 ZNF503Q96F45 646 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 AP5S1Q9NUS5 200 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 A8MWL6 223 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 VWC2LB2RUY7 222 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 CKS1BP61024 79 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 TIMM23BQ5SRD1 257 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 C1orf159Q96HA4 380 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 C18orf15Q96N68 181 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 IDI2-AS1Q9NZ38 188 aa10.35□□□□□ -0.75
VAMP1-201ENST00000361716 SPAARA0A1B0GVQ0 90 aa10.34□□□□□ -0.75
VAMP1-201ENST00000361716 FAM162BQ5T6X4 162 aa10.34□□□□□ -0.75
VAMP1-201ENST00000361716 TRAV8-1A0A0A6YYK1 113 aa10.34□□□□□ -0.75
VAMP1-201ENST00000361716 SP1P08047 785 aa10.34□□□□□ -0.75
VAMP1-201ENST00000361716 SP9P0CG40 484 aa10.34□□□□□ -0.75
VAMP1-201ENST00000361716 ACP1P24666 158 aa10.34□□□□□ -0.75
VAMP1-201ENST00000361716 CACNG7P62955 275 aa10.34□□□□□ -0.75
VAMP1-201ENST00000361716 SEC11AP67812 179 aa10.34□□□□□ -0.75
VAMP1-201ENST00000361716 PSG3Q16557 428 aa10.34□□□□□ -0.75
VAMP1-201ENST00000361716 H1FXQ92522 213 aaKnown RBP10.34□□□□□ -0.75
VAMP1-201ENST00000361716 TTTY13Q9BZ97 58 aa10.34□□□□□ -0.75
VAMP1-201ENST00000361716 IGHV1-2P23083 117 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 RPS20P60866 119 aaKnown RBP10.33□□□□□ -0.76
VAMP1-201ENST00000361716 HSD52Q0P140 79 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 ZNF766Q5HY98 468 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 SAMD5Q5TGI4 173 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 PPP1R35Q8TAP8 253 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 ZNF257Q9Y2Q1 563 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 IGKV1OR2-108A0A075B7D4 117 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 K7EQM0 130 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 COX8AP10176 69 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 HSPE1P61604 102 aaKnown RBP10.33□□□□□ -0.76
VAMP1-201ENST00000361716 TMEM249Q2WGJ8 235 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 RNFT1Q5M7Z0 435 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 SLC35E4Q6ICL7 350 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 ADAMTSL5Q6ZMM2 481 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 NPFFR1Q9GZQ6 430 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 SPENQ96T58 3664 aaKnown RBP10.33□□□□□ -0.76
VAMP1-201ENST00000361716 EXPH5Q8NEV8 1989 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 TRAV26-1A0A087WT03 109 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 IGHV3-72A0A0B4J1Y9 119 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 C21orf140B9A014 251 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 C22orf46C9J442 243 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 C10orf113Q5VZT2 155 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 SFTA2Q6UW10 78 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 WDR82Q6UXN9 313 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 LCNL1Q6ZST4 164 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 SH2D6Q7Z4S9 175 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 ZCCHC24Q8N2G6 241 aaKnown RBP10.33□□□□□ -0.76
VAMP1-201ENST00000361716 CXXC4Q9H2H0 198 aa10.33□□□□□ -0.76
VAMP1-201ENST00000361716 CSN1S1P47710 185 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 DUX4L9Q6RFH8 374 aaPredicted RBP10.32□□□□□ -0.76
VAMP1-201ENST00000361716 PET117Q6UWS5 81 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 PDPNQ86YL7 162 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 PCP2Q8IVA1 136 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 LINC00470Q9BZP3 86 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 NCKAP5O14513 1909 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 KRTAP27-1Q3LI81 207 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 ETDBQ3ZM63 59 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 C2orf91Q6ZV80 131 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 IGF2BP2-AS1Q96M15 143 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 CCL13Q99616 98 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 SLC25A33Q9BSK2 321 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 NHP2Q9NX24 153 aaKnown RBP10.32□□□□□ -0.76
VAMP1-201ENST00000361716 COL6A6A6NMZ7 2263 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms