RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 IGKV2D-40P01614 121 aaPredicted RBP11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 TMEM158Q8WZ71 300 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 PIMREGQ9BSJ6 248 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 K7EP13 123 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 NBR2O15453 112 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 PDLIM4P50479 330 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 EXOC3-AS1Q8N2X6 119 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 LYL1P12980 280 aa11.09□□□□□ -0.63
CCDC144A-203ENST00000360495 CELA3AP09093 270 aa11.09□□□□□ -0.63
CCDC144A-203ENST00000360495 IGLC2P0DOY2 106 aa11.09□□□□□ -0.63
CCDC144A-203ENST00000360495 IGLC3P0DOY3 106 aa11.09□□□□□ -0.63
CCDC144A-203ENST00000360495 TMEM8BA6NDV4 472 aa11.09□□□□□ -0.63
CCDC144A-203ENST00000360495 TFF1P04155 84 aa11.09□□□□□ -0.63
CCDC144A-203ENST00000360495 SCN2AQ99250 2005 aa11.09□□□□□ -0.63
CCDC144A-203ENST00000360495 IGHV2OR16-5A0A0B4J2B6 119 aa11.09□□□□□ -0.63
CCDC144A-203ENST00000360495 FAM57AQ8TBR7 257 aa11.09□□□□□ -0.63
CCDC144A-203ENST00000360495 IGKV1-12A0A0C4DH73 117 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 TIAF1O95411 115 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 IGKV1D-12P01611 117 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 IGHV3-11P01762 117 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 C1orf53Q5VUE5 145 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 ABHD17AQ96GS6 310 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 PMS2P5A8MQ11 134 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 ETDBQ3ZM63 59 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 SLC25A39Q9BZJ4 359 aaPredicted RBP11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 LAMTOR3Q9UHA4 124 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 STRCP1A6NGW2 1772 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 IGKV1-5P01602 117 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 CELA3BP08861 270 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 SRSF7Q16629 238 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 HAX1O00165 279 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 ZNF625Q96I27 306 aaPredicted RBP11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 KIAA1217Q5T5P2 1943 aa11.08□□□□□ -0.64
CCDC144A-203ENST00000360495 SPSB3Q6PJ21 355 aa11.07□□□□□ -0.64
CCDC144A-203ENST00000360495 IMMP1LQ96LU5 166 aa11.07□□□□□ -0.64
CCDC144A-203ENST00000360495 K7EP34 96 aa11.07□□□□□ -0.64
CCDC144A-203ENST00000360495 PAX4O43316 350 aa11.07□□□□□ -0.64
CCDC144A-203ENST00000360495 DEFB104AQ8WTQ1 72 aa11.07□□□□□ -0.64
CCDC144A-203ENST00000360495 VWC2LB2RUY7 222 aa11.07□□□□□ -0.64
CCDC144A-203ENST00000360495 H3BMM0 161 aa11.07□□□□□ -0.64
CCDC144A-203ENST00000360495 LILRA1O75019 489 aa11.07□□□□□ -0.64
CCDC144A-203ENST00000360495 IGHV2-5P01817 119 aa11.07□□□□□ -0.64
CCDC144A-203ENST00000360495 PPDPFLQ8WWR9 84 aa11.07□□□□□ -0.64
CCDC144A-203ENST00000360495 UBE2WQ96B02 151 aa11.07□□□□□ -0.64
CCDC144A-203ENST00000360495 ADARB2-AS1A8MUL3 147 aa11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 TMEM167AQ8TBQ9 72 aa11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 CHD5Q8TDI0 1954 aa11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 TMEM190Q8WZ59 177 aa11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 ARFGEF1Q9Y6D6 1849 aa11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 THSD7AQ9UPZ6 1657 aa11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 PFN1P07737 140 aaKnown RBP11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 APOBEC3AP31941 199 aaPredicted RBP11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 SMRP1Q8NCR6 262 aa11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 JPT2Q9H910 190 aa11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 TRIP12Q14669 1992 aaPredicted RBP11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 OVOL2Q9BRP0 275 aa11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 SMKR1H3BMG3 65 aa11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 SH2D1AO60880 128 aa11.06□□□□□ -0.64
CCDC144A-203ENST00000360495 GAGE12HA6NDE8 117 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 F8W1H4 67 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 IFITM1P13164 125 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 PPP1R32Q7Z5V6 425 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 C1orf162Q8NEQ5 155 aaPredicted RBP11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 TRGV11A0A075B6L2 103 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 SLAQ13239 276 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 ATP1A1-AS1Q5TC04 95 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 AMN1Q8IY45 258 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 MCM3APO60318 1980 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 PRB3Q04118 309 aaPredicted RBP11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 Q6ZWC4 215 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 C18orf32Q8TCD1 76 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 APC2O95996 2303 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 IGHV1-2P23083 117 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 TEX43Q6ZNM6 134 aa11.05□□□□□ -0.64
CCDC144A-203ENST00000360495 OVOL1O14753 267 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 AZU1P20160 251 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 QSER1Q2KHR3 1735 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 TRAV40A0A0B4J280 105 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 DUSP14O95147 198 aaKnown RBP11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 ZNF876PQ49A33 203 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 C10orf55Q5SWW7 151 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 NTF4P34130 210 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 SAP25Q8TEE9 199 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 MYO16Q9Y6X6 1858 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 FAM27E3Q08E93 113 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 FOXF2Q12947 444 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 FAM166AQ6J272 317 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 A0A1B0GWJ7 208 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 ZNF474Q6S9Z5 364 aaPredicted RBP11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 ZIC4Q8N9L1 334 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 TMEM133Q9H2Q1 129 aa11.04□□□□□ -0.64
CCDC144A-203ENST00000360495 DNAJC30Q96LL9 226 aa11.03□□□□□ -0.64
CCDC144A-203ENST00000360495 ESPL1Q14674 2120 aa11.03□□□□□ -0.64
CCDC144A-203ENST00000360495 TRBV20-1A0A075B6N2 111 aa11.03□□□□□ -0.64
CCDC144A-203ENST00000360495 WFDC12Q8WWY7 111 aa11.03□□□□□ -0.64
CCDC144A-203ENST00000360495 RASL10AQ92737 203 aa11.03□□□□□ -0.64
CCDC144A-203ENST00000360495 DPH3P1Q9H4G8 78 aa11.03□□□□□ -0.64
CCDC144A-203ENST00000360495 CSTL1Q9H114 145 aa11.03□□□□□ -0.64
CCDC144A-203ENST00000360495 VCYO14598 125 aa11.03□□□□□ -0.64
CCDC144A-203ENST00000360495 DOCK5Q9H7D0 1870 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms