RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TRGV3P03979 118 aa10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 OR5G3P0C626 314 aa10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 RPL15P61313 204 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 DEFA5Q01523 94 aa10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 C15orf32Q32M92 178 aa10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 TIGITQ495A1 244 aa10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 Q6ZS46 218 aa10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 GATAD1Q8WUU5 269 aa10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 EEF1AKMT3Q96AZ1 226 aa10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 NOL4LQ96MY1 436 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 FAM210AQ96ND0 272 aa10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 MRPL32Q9BYC8 188 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 S4R3C0 116 aa10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 TRBV7-1A0A0A6YYK4 115 aa10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 I3L521 148 aa10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 IFNA1P01562 189 aa10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 PPIFP30405 207 aaKnown RBP10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 FGF8P55075 233 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 TPPP2P59282 170 aa10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 HILS1P60008 231 aa10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 YPEL3P61236 119 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 ATP5G2Q06055 141 aa10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 FAM78BQ5VT40 261 aa10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 ZNF502Q8TBZ5 544 aa10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 MS4A10Q96PG2 267 aa10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 ZNF702PQ9H963 129 aa10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 FUT9Q9Y231 359 aa10.79□□□□□ -0.68
PDLIM5-203ENST00000359265 PSMB11A5LHX3 300 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 HMGB3O15347 200 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 TOMM40O96008 361 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 IGKV1-17P01599 117 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 STAG3L2P0CL84 134 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 STAG3L3P0CL85 134 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 TAS2R45P59539 299 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 PLP1P60201 277 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 CCL20P78556 96 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 CFHR3Q02985 330 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 PEA15Q15121 130 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 GUK1Q16774 197 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 TMEM95Q3KNT9 176 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 TOR2AQ5JU69 321 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 C10orf113Q5VZT2 155 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 DUX5Q96PT3 197 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 ATP6V0BQ99437 205 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 DNAJC4Q9NNZ3 241 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 TREM1Q9NP99 234 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 DOK5Q9P104 306 aa10.78□□□□□ -0.68
PDLIM5-203ENST00000359265 ELOA3CA0A087WX78 387 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 TMEM89A2RUT3 159 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 F8W735 103 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 NUPL2O15504 423 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 EIF3GO75821 320 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 CXorf1O96002 111 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 IGLV1-40P01703 118 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 IGHV3-23P01764 117 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 RNASE1P07998 156 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 RD3LP0DJH9 198 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 PF4V1P10720 104 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 PSG1P11464 419 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 PSMB3P49720 205 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 PPT1P50897 306 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 LYZP61626 148 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 KHDC3LQ587J8 217 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 IQCF2Q8IXL9 164 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 OR51G1Q8NGK1 321 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 OR1B1Q8NGR6 318 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 USMG5Q96IX5 58 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 EIF5A2Q9GZV4 153 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 TECRQ9NZ01 308 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 GNG13Q9P2W3 67 aa10.77□□□□□ -0.69
PDLIM5-203ENST00000359265 RBFOX3A6NFN3 312 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 OR2T8A6NH00 312 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 KRBOX1C9JBD0 128 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 HYPMO75409 117 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 CRYBA1P05813 215 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 ARL14EPLP0DKL9 152 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 ORM2P19652 201 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 GPR183P32249 361 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 TAGLN2P37802 199 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 SLC35B1P78383 322 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 PMS2P11Q13670 270 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 HAGHQ16775 308 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 SPATA31B1PQ5VZV4 182 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 MIR17HGQ75NE6 70 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 Q8N2B8 174 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 Q8WTZ3 238 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 TMEM37Q8WXS4 190 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 NARS2Q96I59 477 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 CCDC140Q96MF4 163 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 SMDT1Q9H4I9 107 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 TMEM231Q9H6L2 316 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 SEPSECSQ9HD40 501 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 ESM1Q9NQ30 184 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 MANBALQ9NQG1 85 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 HIGD1AQ9Y241 93 aa10.76□□□□□ -0.69
PDLIM5-203ENST00000359265 A0A0G2JLM5 398 aa10.75□□□□□ -0.69
PDLIM5-203ENST00000359265 LOC102723971A0A1B0GUV8 181 aa10.75□□□□□ -0.69
PDLIM5-203ENST00000359265 ANKRD34BA5PLL1 514 aa10.75□□□□□ -0.69
PDLIM5-203ENST00000359265 TCF21O43680 179 aa10.75□□□□□ -0.69
PDLIM5-203ENST00000359265 IGHG4P01861 327 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms