RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ATP5LO75964 103 aa11.3□□□□□ -0.6
VCP-201ENST00000358901 MLNRO43193 412 aa11.3□□□□□ -0.6
VCP-201ENST00000358901 YLPM1P49750 1951 aaKnown RBP11.3□□□□□ -0.6
VCP-201ENST00000358901 FABP5P3A8MUU1 101 aa11.3□□□□□ -0.6
VCP-201ENST00000358901 TIMM23O14925 209 aa11.3□□□□□ -0.6
VCP-201ENST00000358901 CACNA1AO00555 2505 aa11.29□□□□□ -0.6
VCP-201ENST00000358901 ETV2O00321 342 aaPredicted RBP11.29□□□□□ -0.6
VCP-201ENST00000358901 PPIFP30405 207 aaKnown RBP11.29□□□□□ -0.6
VCP-201ENST00000358901 KLRB1Q12918 225 aa11.29□□□□□ -0.6
VCP-201ENST00000358901 AMMECR1LQ6DCA0 310 aa11.29□□□□□ -0.6
VCP-201ENST00000358901 PIMREGQ9BSJ6 248 aa11.29□□□□□ -0.6
VCP-201ENST00000358901 GZMBP10144 247 aa11.29□□□□□ -0.6
VCP-201ENST00000358901 OR10J3Q5JRS4 329 aa11.29□□□□□ -0.6
VCP-201ENST00000358901 SCGB3A1Q96QR1 104 aa11.29□□□□□ -0.6
VCP-201ENST00000358901 ZNF256Q9Y2P7 627 aaPredicted RBP11.29□□□□□ -0.6
VCP-201ENST00000358901 TNFSF13O75888 250 aa11.29□□□□□ -0.6
VCP-201ENST00000358901 IGHV3-11P01762 117 aa11.29□□□□□ -0.6
VCP-201ENST00000358901 PDLIM4P50479 330 aa11.29□□□□□ -0.6
VCP-201ENST00000358901 PRSS8Q16651 343 aa11.29□□□□□ -0.6
VCP-201ENST00000358901 PVRIGQ6DKI7 326 aa11.29□□□□□ -0.6
VCP-201ENST00000358901 CDKN1AP38936 164 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 NEU4Q8WWR8 484 aaPredicted RBP11.28□□□□□ -0.6
VCP-201ENST00000358901 TSPOP30536 169 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 ASIPP42127 132 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 SNRPD3P62318 126 aaKnown RBP11.28□□□□□ -0.6
VCP-201ENST00000358901 MLANAQ16655 118 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 C19orf54Q5BKX5 351 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 COLCA1Q6ZS62 124 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 BEX4Q9NWD9 120 aaPredicted RBP11.28□□□□□ -0.6
VCP-201ENST00000358901 SLC25A15Q9Y619 301 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 PMS2P5A8MQ11 134 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 CEACAM4O75871 244 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 MDS2Q8NDY4 140 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 IGKV1D-17A0A075B6S4 117 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 LCN12Q6JVE5 192 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 NEUROG1Q92886 237 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 ANAPC10Q9UM13 185 aa11.28□□□□□ -0.6
VCP-201ENST00000358901 A6NNC1 897 aa11.27□□□□□ -0.6
VCP-201ENST00000358901 RSPO1Q2MKA7 263 aaPredicted RBP11.27□□□□□ -0.6
VCP-201ENST00000358901 FAM71F2Q6NXP2 309 aa11.27□□□□□ -0.6
VCP-201ENST00000358901 EXOC3-AS1Q8N2X6 119 aa11.27□□□□□ -0.6
VCP-201ENST00000358901 ZGRF1Q86YA3 2104 aa11.27□□□□□ -0.61
VCP-201ENST00000358901 H3BUT2 72 aa11.27□□□□□ -0.61
VCP-201ENST00000358901 NDUFS6O75380 124 aaKnown RBP11.27□□□□□ -0.61
VCP-201ENST00000358901 PSG1P11464 419 aa11.27□□□□□ -0.61
VCP-201ENST00000358901 C1orf194Q5T5A4 169 aa11.27□□□□□ -0.61
VCP-201ENST00000358901 SPCS1Q9Y6A9 102 aa11.27□□□□□ -0.61
VCP-201ENST00000358901 WIPF3A6NGB9 483 aa11.27□□□□□ -0.61
VCP-201ENST00000358901 C8orf46Q8TAG6 207 aa11.27□□□□□ -0.61
VCP-201ENST00000358901 NPIPB5A8MRT5 1133 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 CACNG7P62955 275 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 TMEM200BQ69YZ2 307 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 GEMIN7Q9H840 131 aaKnown RBP11.26□□□□□ -0.61
VCP-201ENST00000358901 MBNL3Q9NUK0 354 aaKnown RBP11.26□□□□□ -0.61
VCP-201ENST00000358901 ADIPOQQ15848 244 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 ACTL10Q5JWF8 245 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 MRPL16Q9NX20 251 aaKnown RBP11.26□□□□□ -0.61
VCP-201ENST00000358901 ANAPC1Q9H1A4 1944 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 HBDP02042 147 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 LEPP41159 167 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 PAX9P55771 341 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 ZNF664Q8N3J9 261 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 ALKBH7Q9BT30 221 aaPredicted RBP11.26□□□□□ -0.61
VCP-201ENST00000358901 SCRT1Q9BWW7 348 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.26□□□□□ -0.61
VCP-201ENST00000358901 RHOGP84095 191 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 PAPPA-AS1Q5QFB9 102 aa11.26□□□□□ -0.61
VCP-201ENST00000358901 MED13Q9UHV7 2174 aa11.25□□□□□ -0.61
VCP-201ENST00000358901 ZNF124Q15973 351 aa11.25□□□□□ -0.61
VCP-201ENST00000358901 RAX2Q96IS3 184 aa11.25□□□□□ -0.61
VCP-201ENST00000358901 CRIM1Q9NZV1 1036 aa11.25□□□□□ -0.61
VCP-201ENST00000358901 NDUFA3O95167 84 aa11.25□□□□□ -0.61
VCP-201ENST00000358901 APOMO95445 188 aa11.25□□□□□ -0.61
VCP-201ENST00000358901 IGKV1-16P04430 117 aa11.25□□□□□ -0.61
VCP-201ENST00000358901 KLF17Q5JT82 389 aaPredicted RBP11.25□□□□□ -0.61
VCP-201ENST00000358901 CENPVQ7Z7K6 275 aaPredicted RBP11.25□□□□□ -0.61
VCP-201ENST00000358901 ASCL2Q99929 193 aa11.25□□□□□ -0.61
VCP-201ENST00000358901 TRAV8-1A0A0A6YYK1 113 aa11.25□□□□□ -0.61
VCP-201ENST00000358901 SRSF6Q13247 344 aaKnown RBP11.24□□□□□ -0.61
VCP-201ENST00000358901 ATP5L2Q7Z4Y8 100 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 TMEM167AQ8TBQ9 72 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 GLMPQ8WWB7 406 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 LINC00479Q96M42 142 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 WNK1Q9H4A3 2382 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 A0A1B0GWB2 263 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 PSMB11A5LHX3 300 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 SMAGPQ0VAQ4 97 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 RRN3P1Q2M238 152 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 PROK2Q9HC23 129 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 A0A0G2JLM5 398 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 IGHV1-8P0DP01 117 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 FBLN7Q53RD9 439 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 OR5AN1Q8NGI8 311 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 DUX5Q96PT3 197 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 PLXNA4Q9HCM2 1894 aa11.24□□□□□ -0.61
VCP-201ENST00000358901 IGHV2-26A0A0B4J1V2 119 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 TCRAP04437 139 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 TYMSP04818 313 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 PFN1P07737 140 aaKnown RBP11.23□□□□□ -0.61
VCP-201ENST00000358901 C3orf79P0CE67 100 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms