RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 SGK494Q96LW2 274 aa6.89□□□□□ -1.31
RFX3-202ENST00000358730 ABCA1O95477 2261 aa6.89□□□□□ -1.31
RFX3-202ENST00000358730 IGHV2-26A0A0B4J1V2 119 aa6.89□□□□□ -1.31
RFX3-202ENST00000358730 DIRC3C9JPN6 131 aa6.89□□□□□ -1.31
RFX3-202ENST00000358730 RAB4AP20338 218 aa6.89□□□□□ -1.31
RFX3-202ENST00000358730 C11orf42Q8N5U0 333 aa6.89□□□□□ -1.31
RFX3-202ENST00000358730 NUP35Q8NFH5 326 aa6.89□□□□□ -1.31
RFX3-202ENST00000358730 MBD6Q96DN6 1003 aa6.89□□□□□ -1.31
RFX3-202ENST00000358730 GRAMD2BQ96HH9 432 aa6.89□□□□□ -1.31
RFX3-202ENST00000358730 TCAPO15273 167 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 HIST1H1EP10412 219 aaKnown RBP6.88□□□□□ -1.31
RFX3-202ENST00000358730 ZNF841Q6ZN19 808 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 TEX45Q8NA69 505 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 PRSS33Q8NF86 280 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 NEU1Q99519 415 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 TRGV9Q99603 122 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 EPDR1Q9UM22 224 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 PGPA6NDG6 321 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 HIGD1CA8MV81 97 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 CRYGCP07315 174 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 NTF3P20783 257 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 MYCNOSP40205 109 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 LEMD1Q68G75 181 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 RASL11AQ6T310 242 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 FAM19A2Q8N3H0 131 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 WIPF2Q8TF74 440 aaPredicted RBP6.88□□□□□ -1.31
RFX3-202ENST00000358730 MIEN1Q9BRT3 115 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 CHRDL1Q9BU40 450 aa6.88□□□□□ -1.31
RFX3-202ENST00000358730 H3BTX0 84 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 CORTO00230 105 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 HYPMO75409 117 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 NBEAP1P0C6P0 100 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 Q8N976 141 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 TMEM116Q8NCL8 245 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 OR4B1Q8NGF8 309 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 C18orf32Q8TCD1 76 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 GSX1Q9H4S2 264 aaPredicted RBP6.87□□□□□ -1.31
RFX3-202ENST00000358730 C7orf69Q9H7B7 122 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 SIGLEC9Q9Y336 463 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 INSIG2Q9Y5U4 225 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 LYNX1G3V0Z9 82 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 FAM87AP0C7U9 286 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 LYNX1P0DP58 116 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 COX7A1P24310 79 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 CAMPP49913 170 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 GDF5OSQ5U4N7 250 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 TSKUQ8WUA8 353 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 TNFRSF14Q92956 283 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 RALYQ9UKM9 306 aaKnown RBP6.87□□□□□ -1.31
RFX3-202ENST00000358730 ZNF835Q9Y2P0 537 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 TLN1Q9Y490 2541 aaKnown RBP6.87□□□□□ -1.31
RFX3-202ENST00000358730 MUC6Q6W4X9 2439 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 IGHV1-3A0A0C4DH29 117 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.87□□□□□ -1.31
RFX3-202ENST00000358730 IGLV1-47P01700 117 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 GP9P14770 177 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 APOBEC3AP31941 199 aaPredicted RBP6.87□□□□□ -1.31
RFX3-202ENST00000358730 PRRX1P54821 245 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 PVRIGQ6DKI7 326 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 PPP1R27Q86WC6 154 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 SPACA3Q8IXA5 215 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 GPR82Q96P67 336 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 SSBP4Q9BWG4 385 aaPredicted RBP6.87□□□□□ -1.31
RFX3-202ENST00000358730 CLEC7AQ9BXN2 247 aa6.87□□□□□ -1.31
RFX3-202ENST00000358730 CRYGBP07316 175 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 CD3EP07766 207 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 CASP6P55212 293 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 LYZP61626 148 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 NIT1Q86X76 327 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 C5orf17Q8NAS9 161 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 Q9H3A6 140 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 MRPL27Q9P0M9 148 aaKnown RBP6.86□□□□□ -1.31
RFX3-202ENST00000358730 F11RQ9Y624 299 aaKnown RBP6.86□□□□□ -1.31
RFX3-202ENST00000358730 ZZEF1O43149 2961 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 PTPRZ1P23471 2315 aaPredicted RBP6.86□□□□□ -1.31
RFX3-202ENST00000358730 B9A039 149 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 BUB1B-PAK6H3BSN5 160 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 C3orf79P0CE67 100 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 G0S2P27469 103 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 CA7P43166 264 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 GPR6P46095 362 aaPredicted RBP6.86□□□□□ -1.31
RFX3-202ENST00000358730 PLGLAQ15195 96 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 PIP4P2Q8N4L2 257 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 RPEQ96AT9 228 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 BORCS7Q96B45 105 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 SMIM12Q96EX1 92 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 FBXL15Q9H469 300 aa6.86□□□□□ -1.31
RFX3-202ENST00000358730 RPP21Q9H633 154 aaKnown RBP6.86□□□□□ -1.31
RFX3-202ENST00000358730 CEP295Q9C0D2 2601 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 TEX22C9J3V5 150 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 M0QZK8 103 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 HSBP1O75506 76 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 SPATA45Q537H7 98 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 PRR31Q5SQ13 230 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 TCF24Q7RTU0 167 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 MRPL52Q86TS9 123 aaKnown RBP6.85□□□□□ -1.31
RFX3-202ENST00000358730 OR2D3Q8NGH3 330 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 C8orf46Q8TAG6 207 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 SRSF12Q8WXF0 261 aaKnown RBP6.85□□□□□ -1.31
RFX3-202ENST00000358730 FMC1Q96HJ9 113 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms