RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 DNPH1O43598 174 aa9.38□□□□□ -0.91
CNOT3-202ENST00000358389 DUTP33316 252 aaKnown RBP9.38□□□□□ -0.91
CNOT3-202ENST00000358389 CSN1S1P47710 185 aa9.38□□□□□ -0.91
CNOT3-202ENST00000358389 OR10W1Q8NGF6 305 aa9.38□□□□□ -0.91
CNOT3-202ENST00000358389 TIMD4Q96H15 378 aa9.38□□□□□ -0.91
CNOT3-202ENST00000358389 AP5S1Q9NUS5 200 aa9.38□□□□□ -0.91
CNOT3-202ENST00000358389 J3QR06 171 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 IGLV2-8P01709 118 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 VDAC2P45880 294 aaPredicted RBP9.37□□□□□ -0.91
CNOT3-202ENST00000358389 FXYD7P58549 80 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 PROK2Q9HC23 129 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 SLC25A10Q9UBX3 287 aaPredicted RBP9.37□□□□□ -0.91
CNOT3-202ENST00000358389 TSSC4Q9Y5U2 329 aaPredicted RBP9.37□□□□□ -0.91
CNOT3-202ENST00000358389 KMT2EQ8IZD2 1858 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 NKX2-8O15522 239 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 COX6A1P12074 109 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 LGALS7P47929 136 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 KRTAP27-1Q3LI81 207 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 Q6ZR03 302 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 ZNF257Q9Y2Q1 563 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 ARFGEF3Q5TH69 2177 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 IGHV3-72A0A0B4J1Y9 119 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 COX8AP10176 69 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 HSPE1P61604 102 aaKnown RBP9.37□□□□□ -0.91
CNOT3-202ENST00000358389 HSD52Q0P140 79 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 KLF5Q13887 457 aaPredicted RBP9.37□□□□□ -0.91
CNOT3-202ENST00000358389 FLYWCH2Q96CP2 140 aaKnown RBP9.37□□□□□ -0.91
CNOT3-202ENST00000358389 VPS13AQ96RL7 3174 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 PGPA6NDG6 321 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 COL8A1P27658 744 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 CKS1BP61024 79 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 FOXE3Q13461 319 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 VMA21Q3ZAQ7 101 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 C17orf82Q86X59 251 aaPredicted RBP9.37□□□□□ -0.91
CNOT3-202ENST00000358389 WFDC3Q8IUB2 231 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 CHCHD1Q96BP2 118 aaKnown RBP9.37□□□□□ -0.91
CNOT3-202ENST00000358389 IDI2-AS1Q9NZ38 188 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 METRNQ9UJH8 293 aa9.37□□□□□ -0.91
CNOT3-202ENST00000358389 PCNX2A6NKB5 2137 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 CYC1P08574 325 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 SLC35E4Q6ICL7 350 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 RASL11AQ6T310 242 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 WDR86Q86TI4 376 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 FAM90A27PA6NNH2 459 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 H3BRM9 83 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 RAB9AP51151 201 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 RPEQ96AT9 228 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 HARBI1Q96MB7 349 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 PPIAL4EA0A075B759 164 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 hADV38S2A0JD32 116 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 PPIAL4FP0DN26 164 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 SAMD5Q5TGI4 173 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 SVIPQ8NHG7 77 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 NPFFR1Q9GZQ6 430 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 COL4A2P08572 1712 aa9.36□□□□□ -0.91
CNOT3-202ENST00000358389 PRDX2P32119 198 aa9.35□□□□□ -0.91
CNOT3-202ENST00000358389 LYZP61626 148 aa9.35□□□□□ -0.91
CNOT3-202ENST00000358389 PDPNQ86YL7 162 aa9.35□□□□□ -0.91
CNOT3-202ENST00000358389 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
CNOT3-202ENST00000358389 OR5A1Q8NGJ0 315 aa9.35□□□□□ -0.91
CNOT3-202ENST00000358389 COQ2Q96H96 371 aa9.35□□□□□ -0.91
CNOT3-202ENST00000358389 ONECUT1Q9UBC0 465 aa9.35□□□□□ -0.91
CNOT3-202ENST00000358389 PRRC2CQ9Y520 2896 aaKnown RBP9.35□□□□□ -0.91
CNOT3-202ENST00000358389 SONP18583 2426 aaKnown RBP9.35□□□□□ -0.91
CNOT3-202ENST00000358389 C10orf113Q5VZT2 155 aa9.35□□□□□ -0.91
CNOT3-202ENST00000358389 WDR31Q8NA23 367 aa9.35□□□□□ -0.91
CNOT3-202ENST00000358389 ATP6V0BQ99437 205 aa9.35□□□□□ -0.91
CNOT3-202ENST00000358389 RPP21Q9H633 154 aaKnown RBP9.35□□□□□ -0.91
CNOT3-202ENST00000358389 NBEAQ8NFP9 2946 aa9.35□□□□□ -0.91
CNOT3-202ENST00000358389 HCFC1P51610 2035 aa9.35□□□□□ -0.91
CNOT3-202ENST00000358389 DYSFO75923 2080 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 OR2J3O76001 311 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 PSG3Q16557 428 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 MORN5Q5VZ52 161 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 URB1-AS1Q96HZ7 61 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 IGF2BP2-AS1Q96M15 143 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 CCL13Q99616 98 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 SLC25A33Q9BSK2 321 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 CELSR3Q9NYQ7 3312 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 SMIM13P0DJ93 91 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 B3GALT5-AS1P59052 145 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 PRR20EP86478 221 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 PRR20CP86479 221 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 PRR20DP86480 221 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 PRR20BP86481 221 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 PRR20AP86496 221 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 ZNF146Q15072 292 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 ADAMTSL5Q6ZMM2 481 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 ZNF503Q96F45 646 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 CACNG7P62955 275 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 WIPF2Q8TF74 440 aaPredicted RBP9.34□□□□□ -0.91
CNOT3-202ENST00000358389 PIEZO2Q9H5I5 2752 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 ZGRF1Q86YA3 2104 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 FRYQ5TBA9 3013 aa9.34□□□□□ -0.91
CNOT3-202ENST00000358389 TMSB15BA0A087X1C1 80 aa9.33□□□□□ -0.92
CNOT3-202ENST00000358389 A0A1W2PPM0 123 aa9.33□□□□□ -0.92
CNOT3-202ENST00000358389 CEACAM3P40198 252 aa9.33□□□□□ -0.92
CNOT3-202ENST00000358389 Q8TCH9 128 aa9.33□□□□□ -0.92
CNOT3-202ENST00000358389 PPP1R32Q7Z5V6 425 aa9.33□□□□□ -0.92
CNOT3-202ENST00000358389 C1orf159Q96HA4 380 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms