RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 FLI1Q01543 452 aaPredicted RBP7.16□□□□□ -1.26
UPF2-202ENST00000357604 PSMG4Q5JS54 123 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 SMPXQ9UHP9 88 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 PDE6DO43924 150 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 DEFA5Q01523 94 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 KRTAP1-1Q07627 177 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 SH3BGRL3Q9H299 93 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 SMAD5-AS1Q9Y6J3 95 aa7.16□□□□□ -1.26
UPF2-202ENST00000357604 RGS13O14921 159 aa7.15□□□□□ -1.26
UPF2-202ENST00000357604 UBE2G2P60604 165 aa7.15□□□□□ -1.26
UPF2-202ENST00000357604 NRN1Q9NPD7 142 aa7.15□□□□□ -1.26
UPF2-202ENST00000357604 FOLR2P14207 255 aa7.15□□□□□ -1.26
UPF2-202ENST00000357604 DEFB136Q30KP8 78 aa7.15□□□□□ -1.26
UPF2-202ENST00000357604 SSX7Q7RTT5 188 aa7.15□□□□□ -1.26
UPF2-202ENST00000357604 PCNPQ8WW12 178 aaKnown RBP7.15□□□□□ -1.26
UPF2-202ENST00000357604 IGHV3-49A0A0A0MS15 119 aa7.15□□□□□ -1.26
UPF2-202ENST00000357604 I3L2K1 104 aa7.15□□□□□ -1.26
UPF2-202ENST00000357604 ZNF674Q2M3X9 581 aa7.15□□□□□ -1.26
UPF2-202ENST00000357604 SLC25A39Q9BZJ4 359 aaPredicted RBP7.15□□□□□ -1.26
UPF2-202ENST00000357604 ESM1Q9NQ30 184 aa7.15□□□□□ -1.26
UPF2-202ENST00000357604 WDR83OSQ9Y284 106 aa7.15□□□□□ -1.26
UPF2-202ENST00000357604 DBX1A6NMT0 343 aa7.15□□□□□ -1.27
UPF2-202ENST00000357604 INSP01308 110 aa7.15□□□□□ -1.27
UPF2-202ENST00000357604 RHEBQ15382 184 aa7.15□□□□□ -1.27
UPF2-202ENST00000357604 TOMM20LQ6UXN7 152 aa7.15□□□□□ -1.27
UPF2-202ENST00000357604 SHANK2-AS3Q9BTD1 123 aa7.15□□□□□ -1.27
UPF2-202ENST00000357604 HRH4Q9H3N8 390 aa7.15□□□□□ -1.27
UPF2-202ENST00000357604 GNG13Q9P2W3 67 aa7.15□□□□□ -1.27
UPF2-202ENST00000357604 UBE2CO00762 179 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 GPX1P07203 203 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 ATP6V0CP27449 155 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 RPL7L1Q6DKI1 246 aaKnown RBP7.14□□□□□ -1.27
UPF2-202ENST00000357604 SNURFLB1AK76 121 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 FREM1Q5H8C1 2179 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 TRAV2A0A0B4J234 112 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 C2orf70A6NJV1 201 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 SAPCD1Q5SSQ6 148 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 BTF3L4Q96K17 158 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 IGHV3OR16-13A0A075B7E8 117 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 IGHV3-74A0A0B4J1X5 117 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 A0A0G2JRQ6 117 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 SRSF4Q08170 494 aaKnown RBP7.14□□□□□ -1.27
UPF2-202ENST00000357604 SRD5A3Q9H8P0 318 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 LOC102724200A0A096LPH7 203 aaPredicted RBP7.14□□□□□ -1.27
UPF2-202ENST00000357604 M0R036 132 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 LYPD1Q8N2G4 141 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 NAGKQ9UJ70 344 aa7.14□□□□□ -1.27
UPF2-202ENST00000357604 PROK1P58294 105 aa7.13□□□□□ -1.27
UPF2-202ENST00000357604 RPS20P60866 119 aaKnown RBP7.13□□□□□ -1.27
UPF2-202ENST00000357604 SRSF2Q01130 221 aaKnown RBP7.13□□□□□ -1.27
UPF2-202ENST00000357604 LINC01587Q99440 93 aa7.13□□□□□ -1.27
UPF2-202ENST00000357604 ANKRD11Q6UB99 2663 aaPredicted RBP7.13□□□□□ -1.27
UPF2-202ENST00000357604 MPTX1A8MV57 137 aa7.13□□□□□ -1.27
UPF2-202ENST00000357604 CBLN1P23435 193 aa7.13□□□□□ -1.27
UPF2-202ENST00000357604 TMED6Q8WW62 240 aa7.13□□□□□ -1.27
UPF2-202ENST00000357604 RP1L1Q8IWN7 2480 aaPredicted RBP7.13□□□□□ -1.27
UPF2-202ENST00000357604 PDE6HQ13956 83 aa7.13□□□□□ -1.27
UPF2-202ENST00000357604 DUX3Q96PT4 197 aa7.13□□□□□ -1.27
UPF2-202ENST00000357604 GGTLC1Q9BX51 225 aa7.13□□□□□ -1.27
UPF2-202ENST00000357604 TRGV11A0A075B6L2 103 aa7.13□□□□□ -1.27
UPF2-202ENST00000357604 IGHV3OR16-12A0A075B7B8 117 aa7.13□□□□□ -1.27
UPF2-202ENST00000357604 ZNF98A6NK75 572 aa7.13□□□□□ -1.27
UPF2-202ENST00000357604 HIST1H2BAQ96A08 127 aa7.13□□□□□ -1.27
UPF2-202ENST00000357604 H3BRN7 92 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 S100A8P05109 93 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 IGLL1P15814 213 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 CXCL3P19876 107 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 GNG4P50150 75 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 RANP62826 216 aaKnown RBP7.12□□□□□ -1.27
UPF2-202ENST00000357604 NDPQ00604 133 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 IFITM3Q01628 133 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 H2BFSP57053 126 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 Q6ZRM9 215 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 C5orf17Q8NAS9 161 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 PIFOQ8TCI5 191 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 ISLRO14498 428 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 FCN3O75636 299 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 NBEAP1P0C6P0 100 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 RPL35AP18077 110 aaKnown RBP7.12□□□□□ -1.27
UPF2-202ENST00000357604 KLF5Q13887 457 aaPredicted RBP7.12□□□□□ -1.27
UPF2-202ENST00000357604 FOXI2Q6ZQN5 318 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 CHAC2Q8WUX2 184 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 SAT2Q96F10 170 aaPredicted RBP7.12□□□□□ -1.27
UPF2-202ENST00000357604 KCNS1Q96KK3 526 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 LINC00477Q96M19 166 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 K7EIM0 57 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 DLX4Q92988 240 aaPredicted RBP7.12□□□□□ -1.27
UPF2-202ENST00000357604 FMC1Q96HJ9 113 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 KLK15Q9H2R5 256 aa7.12□□□□□ -1.27
UPF2-202ENST00000357604 Q6ZPA2 131 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 CITED1Q99966 193 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 IGHV3OR16-8A0A075B7F1 116 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 TRBV9A0A0B4J1U6 114 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 PGPA6NDG6 321 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 IGLC1P0CG04 106 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 RCHY1Q96PM5 261 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 MGST2Q99735 147 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 LYL1P12980 280 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 GCHFRP30047 84 aa7.11□□□□□ -1.27
UPF2-202ENST00000357604 ZNF90Q03938 601 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms