RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 CRIM1Q9NZV1 1036 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 WISP1O95388 367 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 APOMO95445 188 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 PPBPP02775 128 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 ZNF56Q15929 161 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 PRSS8Q16651 343 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 COQ2Q96H96 371 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 SPRR3Q9UBC9 169 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 ZNF418Q8TF45 676 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 HS3ST6Q96QI5 342 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 TMEM133Q9H2Q1 129 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 PRDM6Q9NQX0 595 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 PAX9P55771 341 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 DDB2Q92466 427 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 ARPC1AQ92747 370 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 METRNQ9UJH8 293 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 TDGF1P3P51864 188 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 LINC00205P59089 165 aa12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 CIRBPQ14011 172 aaKnown RBP12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 MRPL52Q86TS9 123 aaKnown RBP12.87□□□□□ -0.35
TRAPPC11-202ENST00000357207 SLC25A48Q6ZT89 311 aaKnown RBP12.86□□□□□ -0.35
TRAPPC11-202ENST00000357207 NXT2Q9NPJ8 142 aaKnown RBP12.86□□□□□ -0.35
TRAPPC11-202ENST00000357207 USF3Q68DE3 2245 aa12.86□□□□□ -0.35
TRAPPC11-202ENST00000357207 SFTPCP11686 197 aa12.86□□□□□ -0.35
TRAPPC11-202ENST00000357207 ASIPP42127 132 aa12.86□□□□□ -0.35
TRAPPC11-202ENST00000357207 LINC01560Q8TB33 94 aa12.86□□□□□ -0.35
TRAPPC11-202ENST00000357207 ASCL2Q99929 193 aa12.86□□□□□ -0.35
TRAPPC11-202ENST00000357207 C19orf54Q5BKX5 351 aa12.86□□□□□ -0.35
TRAPPC11-202ENST00000357207 C8orf46Q8TAG6 207 aa12.86□□□□□ -0.35
TRAPPC11-202ENST00000357207 MRPL27Q9P0M9 148 aaKnown RBP12.86□□□□□ -0.35
TRAPPC11-202ENST00000357207 ETV2O00321 342 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 B3GALT5-AS1P59052 145 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 IL15RAQ13261 267 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 CD177Q8N6Q3 437 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 PLXND1Q9Y4D7 1925 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 CLEC2AQ6UVW9 174 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 NDUFA3O95167 84 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 UCNP55089 124 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 MPV17L2Q567V2 206 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 OR5A1Q8NGJ0 315 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 C20orf144Q9BQM9 153 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 GEMIN7Q9H840 131 aaKnown RBP12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 NLRC5Q86WI3 1866 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 NBR2O15453 112 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 HSD52Q0P140 79 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 NUP35Q8NFH5 326 aa12.85□□□□□ -0.35
TRAPPC11-202ENST00000357207 WIPF3A6NGB9 483 aa12.84□□□□□ -0.35
TRAPPC11-202ENST00000357207 TRGV3P03979 118 aa12.84□□□□□ -0.35
TRAPPC11-202ENST00000357207 POLR3KQ9Y2Y1 108 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC11-202ENST00000357207 THADAQ6YHU6 1953 aa12.84□□□□□ -0.35
TRAPPC11-202ENST00000357207 DPM2O94777 84 aa12.84□□□□□ -0.35
TRAPPC11-202ENST00000357207 SAMD13Q5VXD3 122 aa12.84□□□□□ -0.35
TRAPPC11-202ENST00000357207 SNHG12Q9BXW3 62 aa12.84□□□□□ -0.35
TRAPPC11-202ENST00000357207 HELZP42694 1942 aaKnown RBP12.84□□□□□ -0.35
TRAPPC11-202ENST00000357207 MBNL3Q9NUK0 354 aaKnown RBP12.84□□□□□ -0.35
TRAPPC11-202ENST00000357207 FNDC1Q4ZHG4 1894 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC11-202ENST00000357207 IGHV1-46P01743 117 aa12.83□□□□□ -0.35
TRAPPC11-202ENST00000357207 PRB3Q04118 309 aaPredicted RBP12.83□□□□□ -0.35
TRAPPC11-202ENST00000357207 LY6EQ16553 131 aa12.83□□□□□ -0.35
TRAPPC11-202ENST00000357207 COLCA1Q6ZS62 124 aa12.83□□□□□ -0.35
TRAPPC11-202ENST00000357207 FAM57AQ8TBR7 257 aa12.83□□□□□ -0.35
TRAPPC11-202ENST00000357207 A0A1B0GUS0 222 aa12.83□□□□□ -0.36
TRAPPC11-202ENST00000357207 Q0VG73 95 aa12.83□□□□□ -0.36
TRAPPC11-202ENST00000357207 UBE2V1Q13404 147 aa12.83□□□□□ -0.36
TRAPPC11-202ENST00000357207 TCRAP04437 139 aa12.83□□□□□ -0.36
TRAPPC11-202ENST00000357207 PLCE1Q9P212 2302 aa12.83□□□□□ -0.36
TRAPPC11-202ENST00000357207 IGKV3-20P01619 116 aa12.82□□□□□ -0.36
TRAPPC11-202ENST00000357207 OR9G4Q8NGQ1 327 aa12.82□□□□□ -0.36
TRAPPC11-202ENST00000357207 hDV102S1A0JD36 115 aa12.82□□□□□ -0.36
TRAPPC11-202ENST00000357207 PRR31Q5SQ13 230 aa12.82□□□□□ -0.36
TRAPPC11-202ENST00000357207 CEACAM4O75871 244 aa12.82□□□□□ -0.36
TRAPPC11-202ENST00000357207 MYOD1P15172 320 aa12.82□□□□□ -0.36
TRAPPC11-202ENST00000357207 EMP1P54849 157 aa12.82□□□□□ -0.36
TRAPPC11-202ENST00000357207 LHFPL4Q7Z7J7 247 aa12.82□□□□□ -0.36
TRAPPC11-202ENST00000357207 PMS2P5A8MQ11 134 aa12.82□□□□□ -0.36
TRAPPC11-202ENST00000357207 Q0VFX4 171 aa12.82□□□□□ -0.36
TRAPPC11-202ENST00000357207 CLEC19AQ6UXS0 136 aa12.82□□□□□ -0.36
TRAPPC11-202ENST00000357207 VKORC1Q9BQB6 163 aa12.82□□□□□ -0.36
TRAPPC11-202ENST00000357207 PSG1P11464 419 aa12.81□□□□□ -0.36
TRAPPC11-202ENST00000357207 PPIFP30405 207 aaKnown RBP12.81□□□□□ -0.36
TRAPPC11-202ENST00000357207 TMEM167AQ8TBQ9 72 aa12.81□□□□□ -0.36
TRAPPC11-202ENST00000357207 SLC50A1Q9BRV3 221 aa12.81□□□□□ -0.36
TRAPPC11-202ENST00000357207 EXOC3-AS1Q8N2X6 119 aa12.81□□□□□ -0.36
TRAPPC11-202ENST00000357207 SYS1-DBNDD2H3BUS1 97 aa12.81□□□□□ -0.36
TRAPPC11-202ENST00000357207 SNRPD3P62318 126 aaKnown RBP12.81□□□□□ -0.36
TRAPPC11-202ENST00000357207 ZNF726P1Q15940 193 aa12.81□□□□□ -0.36
TRAPPC11-202ENST00000357207 PLXNA4Q9HCM2 1894 aa12.81□□□□□ -0.36
TRAPPC11-202ENST00000357207 NPIPB5A8MRT5 1133 aa12.8□□□□□ -0.36
TRAPPC11-202ENST00000357207 MEIG1Q5JSS6 88 aa12.8□□□□□ -0.36
TRAPPC11-202ENST00000357207 FAM71F2Q6NXP2 309 aa12.8□□□□□ -0.36
TRAPPC11-202ENST00000357207 CD24P25063 80 aa12.8□□□□□ -0.36
TRAPPC11-202ENST00000357207 RIPPLY3P57055 190 aa12.8□□□□□ -0.36
TRAPPC11-202ENST00000357207 SFTA2Q6UW10 78 aa12.8□□□□□ -0.36
TRAPPC11-202ENST00000357207 DMRTC2Q8IXT2 367 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC11-202ENST00000357207 CSRP1P21291 193 aaKnown RBP12.8□□□□□ -0.36
TRAPPC11-202ENST00000357207 NAA38Q9BRA0 125 aaKnown RBP12.8□□□□□ -0.36
TRAPPC11-202ENST00000357207 MLNRO43193 412 aa12.8□□□□□ -0.36
TRAPPC11-202ENST00000357207 SRSF1Q07955 248 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRAPPC11-202ENST00000357207 COPS9Q8WXC6 57 aa12.8□□□□□ -0.36
TRAPPC11-202ENST00000357207 ERVK11-1P61568 191 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms