RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 FAM223BA6NKX1 122 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 OR5G3P0C626 314 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 TPPP2P59282 170 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 FAM223AQ8IWN6 122 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 CCDC140Q96MF4 163 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 TXN2Q99757 166 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 EIF5A2Q9GZV4 153 aaKnown RBP14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 TREM1Q9NP99 234 aa14.1□□□□□ -0.15
SMARCD3-202ENST00000356800 TRAV30A0A087WSZ9 112 aa14.09□□□□□ -0.15
SMARCD3-202ENST00000356800 TMEM218A2RU14 115 aa14.09□□□□□ -0.15
SMARCD3-202ENST00000356800 RBFOX3A6NFN3 312 aa14.09□□□□□ -0.15
SMARCD3-202ENST00000356800 STAG3L2P0CL84 134 aa14.09□□□□□ -0.15
SMARCD3-202ENST00000356800 STAG3L3P0CL85 134 aa14.09□□□□□ -0.15
SMARCD3-202ENST00000356800 PF4V1P10720 104 aa14.09□□□□□ -0.15
SMARCD3-202ENST00000356800 Q56UQ5 140 aa14.09□□□□□ -0.15
SMARCD3-202ENST00000356800 OR1L4Q8NGR5 311 aa14.09□□□□□ -0.15
SMARCD3-202ENST00000356800 RNF2Q99496 336 aa14.09□□□□□ -0.15
SMARCD3-202ENST00000356800 TMEM231Q9H6L2 316 aa14.09□□□□□ -0.15
SMARCD3-202ENST00000356800 DNAJC4Q9NNZ3 241 aa14.09□□□□□ -0.15
SMARCD3-202ENST00000356800 FUT9Q9Y231 359 aa14.09□□□□□ -0.15
SMARCD3-202ENST00000356800 HMGB3O15347 200 aaKnown RBP14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 GNG7O60262 68 aa14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 CRLF1O75462 422 aa14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 EIF3GO75821 320 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 FABP1P07148 127 aa14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 PSMB8P28062 276 aa14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 PLP1P60201 277 aa14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 ATP5G2Q06055 141 aa14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 FAM78BQ5VT40 261 aa14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 TMEM37Q8WXS4 190 aa14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 NARS2Q96I59 477 aaKnown RBP14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 LINC00052Q96N35 136 aa14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 PFDN5Q99471 154 aa14.08□□□□□ -0.16
SMARCD3-202ENST00000356800 ELOA3CA0A087WX78 387 aaPredicted RBP14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 OR2T8A6NH00 312 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 CTSGP08311 255 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 RAB9AP51151 201 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 ZNF506Q5JVG8 444 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 EEF1AKMT3Q96AZ1 226 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 MRPL32Q9BYC8 188 aaKnown RBP14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 GNG13Q9P2W3 67 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 C9JQL5 133 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 CXorf1O96002 111 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 PSG1P11464 419 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 ADMP35318 185 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 PSMB3P49720 205 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 RPL15P61313 204 aaKnown RBP14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 ZNF414Q96IQ9 312 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 RARRES2Q99969 163 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 CHRDL1Q9BU40 450 aa14.07□□□□□ -0.16
SMARCD3-202ENST00000356800 TRBV7-1A0A0A6YYK4 115 aa14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 COX7A2P2O60397 106 aa14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 IFNA1P01562 189 aa14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 CLEC3BP05452 202 aa14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 BCL2P10415 239 aa14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 GPR183P32249 361 aa14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 TAGLN2P37802 199 aaKnown RBP14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 YPEL3P61236 119 aaPredicted RBP14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 KIAA0141Q14154 515 aaPredicted RBP14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 HAGHQ16775 308 aa14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 KHDC3LQ587J8 217 aa14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 SPATA31B1PQ5VZV4 182 aa14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 CLEC19AQ6UXS0 136 aa14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 USMG5Q96IX5 58 aa14.06□□□□□ -0.16
SMARCD3-202ENST00000356800 LOC102723971A0A1B0GUV8 181 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 TMEM89A2RUT3 159 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 SCGB2A1O75556 95 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 RD3LP0DJH9 198 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 ARL14EPLP0DKL9 152 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 PPT1P50897 306 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 C10orf113Q5VZT2 155 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 PATE2Q6UY27 113 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 MIR17HGQ75NE6 70 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 JMJD8Q96S16 334 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 ATP6V0BQ99437 205 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 TMPRSS5Q9H3S3 457 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 MANBALQ9NQG1 85 aa14.05□□□□□ -0.16
SMARCD3-202ENST00000356800 TOMM40O96008 361 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 HSPB1P04792 205 aaKnown RBP14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 TAS2R45P59539 299 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 SLC35B1P78383 322 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 ICAM4Q14773 271 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 C10orf91Q5T1B1 145 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 GAR1Q9NY12 217 aaKnown RBP14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 TECRQ9NZ01 308 aaKnown RBP14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 DOK5Q9P104 306 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 VAX2Q9UIW0 290 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 HYPMO75409 117 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 IGHV3-11P01762 117 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 CRYBA1P05813 215 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 SFTA3P0C7M3 94 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 FOXE3Q13461 319 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 TEX38Q6PEX7 206 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 PQLC2Q6ZP29 291 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 SEC11CQ9BY50 192 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 SLC35B3Q9H1N7 401 aa14.04□□□□□ -0.16
SMARCD3-202ENST00000356800 RPLP1P05386 114 aaKnown RBP14.03□□□□□ -0.16
SMARCD3-202ENST00000356800 C8orf88P0DMB2 117 aa14.03□□□□□ -0.16
SMARCD3-202ENST00000356800 ADCYAP1P18509 176 aa14.03□□□□□ -0.16
SMARCD3-202ENST00000356800 ORM2P19652 201 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms