RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 LAGE3Q14657 143 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 EDA2RQ9HAV5 297 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 GBF1Q92538 1859 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 TRAV1-1A0A0B4J248 108 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 VWC2LB2RUY7 222 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 J3QKU1 62 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 IGHV1-8P0DP01 117 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 PYY3Q5JQD4 70 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 SSBP4Q9BWG4 385 aaPredicted RBP4.58□□□□□ -1.68
PTPRD-202ENST00000356435 SMPXQ9UHP9 88 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 MYO7AQ13402 2215 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 PIP4P2Q8N4L2 257 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 EPDR1Q9UM22 224 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 COL11A1P12107 1806 aaPredicted RBP4.58□□□□□ -1.68
PTPRD-202ENST00000356435 LEPROTO15243 131 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 PAX4O43316 350 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 CD24P25063 80 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 APOC4P55056 127 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 LCNL1Q6ZST4 164 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 MTCL1Q9Y4B5 1905 aaKnown RBP4.58□□□□□ -1.68
PTPRD-202ENST00000356435 IGLV3-12A0A075B6K2 115 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.58□□□□□ -1.68
PTPRD-202ENST00000356435 IGHV3-73A0A0B4J1V6 119 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 A0A1B0GV72 72 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 SLC17A3O00476 420 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 LGALS1P09382 135 aaKnown RBP4.58□□□□□ -1.68
PTPRD-202ENST00000356435 GATA4P43694 442 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 PRB3Q04118 309 aaPredicted RBP4.58□□□□□ -1.68
PTPRD-202ENST00000356435 PLEKHB2Q96CS7 222 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 RNF126Q9BV68 326 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 A0A1B0GV90 55 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 ZFP36L1Q07352 338 aaKnown RBP4.58□□□□□ -1.68
PTPRD-202ENST00000356435 IL15RAQ13261 267 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 ASXL3Q9C0F0 2248 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 CHD5Q8TDI0 1954 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 IGKCP01834 107 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 C14orf144Q96I85 54 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 PSG8Q9UQ74 426 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 NKAPP1Q8N9T2 125 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 IGHV1-3A0A0C4DH29 117 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 FAM90A2PQ658T7 463 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 RASL11AQ6T310 242 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 TRAV9-2A0A087WT02 112 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 TRAV8-2A0A0B4J237 113 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 INS-IGF2F8WCM5 200 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 LHBP01229 141 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 DAD1P61803 113 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 SRSF6Q13247 344 aaKnown RBP4.57□□□□□ -1.68
PTPRD-202ENST00000356435 GFI1BQ5VTD9 330 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 GATD1Q8NB37 220 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 OR10W1Q8NGF6 305 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 DEPPQ9NTK1 212 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 LINC01619G3V211 115 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 COA6Q5JTJ3 125 aaKnown RBP4.57□□□□□ -1.68
PTPRD-202ENST00000356435 ATP5L2Q7Z4Y8 100 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 HIST3H2BBQ8N257 126 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 KLF12Q9Y4X4 402 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 MCM3APO60318 1980 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 SBF1O95248 1867 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 HIST1H2BKO60814 126 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 HIST1H2BJP06899 126 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 HIST1H2BOP23527 126 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 GATA2P23769 480 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-202ENST00000356435 HIST1H2BBP33778 126 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 HIST1H2BDP58876 126 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 HIST1H2BCP62807 126 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 HIST2H2BEQ16778 126 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-202ENST00000356435 BRD3OSQ6XYD6 125 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 WFDC12Q8WWY7 111 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 HIST1H2BHQ93079 126 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 HIST1H2BNQ99877 126 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 HIST1H2BMQ99879 126 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 DAZ1Q9NQZ3 744 aaKnown RBP4.57□□□□□ -1.68
PTPRD-202ENST00000356435 PLSCR4Q9NRQ2 329 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 H0YIZ8 118 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 ZNF561-AS1K7EIQ3 104 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 CA1P00915 261 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-202ENST00000356435 AMBPP02760 352 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 ATP5G3P48201 142 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 GAGE1Q13065 139 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 ZNF525Q8N782 197 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 PRDM13Q9H4Q3 707 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 KIF26BQ2KJY2 2108 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 TDRD15B5MCY1 1934 aaKnown RBP4.57□□□□□ -1.68
PTPRD-202ENST00000356435 NTN3O00634 580 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-202ENST00000356435 IGHV3-53P01767 116 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 SP5Q6BEB4 398 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-202ENST00000356435 LHFPL1Q86WI0 220 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 MSRB2Q9Y3D2 182 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 A0A1W2PRE2 83 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 SRRM4A7MD48 611 aaKnown RBP4.57□□□□□ -1.68
PTPRD-202ENST00000356435 FHL1Q13642 323 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 C5orf30Q96GV9 206 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 IMMP2LQ96T52 175 aa4.57□□□□□ -1.68
PTPRD-202ENST00000356435 TRIP12Q14669 1992 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-202ENST00000356435 DEFB130BP0DP73 79 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 DEFB130AP0DP74 79 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 PAQR4Q8N4S7 273 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-202ENST00000356435 C18orf12Q96KH6 178 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms