RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 CHTOPQ9Y3Y2 248 aaKnown RBP14.82□□□□□ -0.04
COL18A1-202ENST00000355480 A0A0U1RRA0 63 aa14.82□□□□□ -0.04
COL18A1-202ENST00000355480 TMEM95Q3KNT9 176 aa14.82□□□□□ -0.04
COL18A1-202ENST00000355480 SPSB3Q6PJ21 355 aa14.82□□□□□ -0.04
COL18A1-202ENST00000355480 SCRT1Q9BWW7 348 aa14.82□□□□□ -0.04
COL18A1-202ENST00000355480 WFDC1Q9HC57 220 aa14.82□□□□□ -0.04
COL18A1-202ENST00000355480 IGHV3-73A0A0B4J1V6 119 aa14.82□□□□□ -0.04
COL18A1-202ENST00000355480 ARHGEF17Q96PE2 2063 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-202ENST00000355480 SPCS1Q9Y6A9 102 aa14.82□□□□□ -0.04
COL18A1-202ENST00000355480 A0A1B0GWJ7 208 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 M0R1W7 72 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 SLC25A48Q6ZT89 311 aaKnown RBP14.81□□□□□ -0.04
COL18A1-202ENST00000355480 TRAV2A0A0B4J234 112 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 LILRA1O75019 489 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 CA1P00915 261 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-202ENST00000355480 RNF5Q99942 180 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 NDPQ00604 133 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 PAX2Q02962 417 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 KLF17Q5JT82 389 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-202ENST00000355480 SLC25A39Q9BZJ4 359 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-202ENST00000355480 DOCK4Q8N1I0 1966 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 CHD5Q8TDI0 1954 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 MBD3L4A6NDZ8 208 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-202ENST00000355480 MBD3L3A6NE82 208 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-202ENST00000355480 MBD3L5A6NJ08 208 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-202ENST00000355480 SFTA2Q6UW10 78 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 PIP4P2Q8N4L2 257 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 MBD3L2Q8NHZ7 208 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-202ENST00000355480 MPZP25189 248 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 EXOC3-AS1Q8N2X6 119 aa14.81□□□□□ -0.04
COL18A1-202ENST00000355480 STAG3L3P0CL85 134 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 C5orf64Q2M2E5 130 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 KLHL30-AS1Q8NEE0 82 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 TSKUQ8WUA8 353 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 TMEM170AQ8WVE7 144 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 A0A1B0GV90 55 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 TMEM8BA6NDV4 472 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 IGHV4-39P01824 125 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 ACTL10Q5JWF8 245 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 ZNF329Q86UD4 541 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 C1QL4Q86Z23 238 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 IGHV3-64A0A075B6Q5 118 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 TRGV1A0A0A0MS02 117 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 CD5P06127 495 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 TEX38Q6PEX7 206 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 GAFA1Q96PS6 74 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 GGTLC1Q9BX51 225 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 C11orf68Q9H3H3 251 aaKnown RBP14.8□□□□□ -0.04
COL18A1-202ENST00000355480 LCNL1Q6ZST4 164 aa14.8□□□□□ -0.04
COL18A1-202ENST00000355480 TRBV7-1A0A0A6YYK4 115 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 RIPPLY3P57055 190 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 BUB1B-PAK6H3BSN5 160 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 Q6ZS92 163 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 TMEM86BQ8N661 226 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 F8VVB4 439 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 F8VWA3 439 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 LY6HO94772 140 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 FXYD7P58549 80 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 LOC285556D6RIA3 1793 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 SRRM4A7MD48 611 aaKnown RBP14.79□□□□□ -0.04
COL18A1-202ENST00000355480 GZMBP10144 247 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 PLNP26678 52 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 LINC00158P58513 81 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 SRSF3P84103 164 aaKnown RBP14.79□□□□□ -0.04
COL18A1-202ENST00000355480 CRIM1Q9NZV1 1036 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 H0YJW9 148 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 CLPSP04118 112 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 SLC25A16P16260 332 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 SPATA31B1PQ5VZV4 182 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 OR5A1Q8NGJ0 315 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 BPESC1Q9GZL8 116 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 NEUROG3Q9Y4Z2 214 aa14.79□□□□□ -0.04
COL18A1-202ENST00000355480 RALGAPA2Q2PPJ7 1873 aa14.78□□□□□ -0.04
COL18A1-202ENST00000355480 COL8A2P25067 703 aa14.78□□□□□ -0.04
COL18A1-202ENST00000355480 LINC01356Q8N9X3 169 aa14.78□□□□□ -0.04
COL18A1-202ENST00000355480 NHP2Q9NX24 153 aaKnown RBP14.78□□□□□ -0.04
COL18A1-202ENST00000355480 TRAV3A0A0B4J244 114 aa14.78□□□□□ -0.04
COL18A1-202ENST00000355480 IGHV3-53P01767 116 aa14.78□□□□□ -0.04
COL18A1-202ENST00000355480 TDGF1P3P51864 188 aa14.78□□□□□ -0.04
COL18A1-202ENST00000355480 CKS1BP61024 79 aa14.78□□□□□ -0.04
COL18A1-202ENST00000355480 ASCL4Q6XD76 172 aa14.78□□□□□ -0.04
COL18A1-202ENST00000355480 FCN3O75636 299 aa14.77□□□□□ -0.04
COL18A1-202ENST00000355480 DICER1Q9UPY3 1922 aaKnown RBP14.77□□□□□ -0.04
COL18A1-202ENST00000355480 S100A7L2Q5SY68 101 aa14.77□□□□□ -0.04
COL18A1-202ENST00000355480 GREB1LQ9C091 1923 aaPredicted RBP14.77□□□□□ -0.05
COL18A1-202ENST00000355480 IGKCP01834 107 aa14.77□□□□□ -0.05
COL18A1-202ENST00000355480 KLHDC3Q9BQ90 382 aa14.77□□□□□ -0.05
COL18A1-202ENST00000355480 THADAQ6YHU6 1953 aa14.77□□□□□ -0.05
COL18A1-202ENST00000355480 RPL36AP83881 106 aaKnown RBP14.76□□□□□ -0.05
COL18A1-202ENST00000355480 CD300EQ496F6 205 aaPredicted RBP14.76□□□□□ -0.05
COL18A1-202ENST00000355480 ATRAIDQ6UW56 229 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 FAM169BQ8N8A8 192 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 RPL36ALQ969Q0 106 aaKnown RBP14.76□□□□□ -0.05
COL18A1-202ENST00000355480 TRGV9Q99603 122 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 MSRB2Q9Y3D2 182 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 H3BUT2 72 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 C9orf139Q6ZV77 190 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 PHLDA1Q8WV24 401 aaPredicted RBP14.76□□□□□ -0.05
COL18A1-202ENST00000355480 MBD3L1Q8WWY6 194 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 GNB1LQ9BYB4 327 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms