RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 TDGF1P3P51864 188 aa5.4□□□□□ -1.54
TTC3-201ENST00000354749 BCL6BQ8N143 479 aaPredicted RBP5.4□□□□□ -1.54
TTC3-201ENST00000354749 RPRMLQ8N4K4 120 aa5.4□□□□□ -1.54
TTC3-201ENST00000354749 TRGV2A0A075B6R0 118 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 SIGLEC12Q96PQ1 595 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 OVOL2Q9BRP0 275 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 TRBV6-6A0A0A6YYG2 114 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 TRAV2A0A0B4J234 112 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 DUSP14O95147 198 aaKnown RBP5.4□□□□□ -1.55
TTC3-201ENST00000354749 SRSF6Q13247 344 aaKnown RBP5.4□□□□□ -1.55
TTC3-201ENST00000354749 CENPVQ7Z7K6 275 aaPredicted RBP5.4□□□□□ -1.55
TTC3-201ENST00000354749 SPANXA1Q9NS26 97 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 WNK3Q9BYP7 1800 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 NDUFS6O75380 124 aaKnown RBP5.4□□□□□ -1.55
TTC3-201ENST00000354749 TPTE2P1Q5T6R2 138 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 TMEM86BQ8N661 226 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 NPFFR1Q9GZQ6 430 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 GFRA4Q9GZZ7 299 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 ERG28Q9UKR5 140 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 SYS1-DBNDD2H3BUS1 97 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 MST1P26927 711 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 MPV17L2Q567V2 206 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 FLVCR1-AS1Q8TAF5 88 aa5.4□□□□□ -1.55
TTC3-201ENST00000354749 NYNRINQ9P2P1 1898 aaKnown RBP5.39□□□□□ -1.55
TTC3-201ENST00000354749 PRR19A6NJB7 356 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 PF4P02776 101 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 C20orf144Q9BQM9 153 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 ATRXP46100 2492 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 EPOPA6NHQ4 379 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 GFRA3O60609 400 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 MALP21145 153 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 FAM90A2PQ658T7 463 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 Q6ZS49 121 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 TRGV9Q99603 122 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 BRCA1P38398 1863 aaKnown RBP5.39□□□□□ -1.55
TTC3-201ENST00000354749 LOC102723996A0A087X1L8 192 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 CD300EQ496F6 205 aaPredicted RBP5.39□□□□□ -1.55
TTC3-201ENST00000354749 PLEKHB2Q96CS7 222 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 TRAV5A0A0B4J249 113 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 C3orf79P0CE67 100 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 TDGF1P13385 188 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 RHOGP84095 191 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 S100A7L2Q5SY68 101 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 LINC01560Q8TB33 94 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 IGKV1-12A0A0C4DH73 117 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 IGKV1-5P01602 117 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 IGKV1D-12P01611 117 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 ZNF319Q9P2F9 582 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 CFPP27918 469 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 FAM27E3Q08E93 113 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 TMEM256Q8N2U0 113 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 IGHV3OR16-10A0A075B7F0 116 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 SRRM5B3KS81 715 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 KIR3DS1Q14943 382 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 SPATA31B1PQ5VZV4 182 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 SIGLEC15Q6ZMC9 328 aa5.39□□□□□ -1.55
TTC3-201ENST00000354749 IGKV1-27A0A075B6S5 117 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 CCL3L1P16619 93 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 PHLDA1Q8WV24 401 aaPredicted RBP5.38□□□□□ -1.55
TTC3-201ENST00000354749 NABP1Q96AH0 204 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 PLXNA1Q9UIW2 1896 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 NBASA2RRP1 2371 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 TRAV8-1A0A0A6YYK1 113 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 ADCYAP1P18509 176 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 RPUSD1Q9UJJ7 312 aaKnown RBP5.38□□□□□ -1.55
TTC3-201ENST00000354749 NUP35Q8NFH5 326 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 IGHV3-11P01762 117 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 LGALS1P09382 135 aaKnown RBP5.38□□□□□ -1.55
TTC3-201ENST00000354749 EVI2AP22794 236 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 FDCSPQ8NFU4 85 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 RNF5Q99942 180 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 EREGO14944 169 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 SPAG8Q99932 426 aaPredicted RBP5.38□□□□□ -1.55
TTC3-201ENST00000354749 CD5LO43866 347 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 NCR2O95944 276 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 QRFPP83859 136 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 GTSCR1Q86UQ5 136 aa5.38□□□□□ -1.55
TTC3-201ENST00000354749 A0A1B0GWJ7 208 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 SSBP2P81877 361 aaPredicted RBP5.37□□□□□ -1.55
TTC3-201ENST00000354749 PDCD11Q14690 1871 aaKnown RBP5.37□□□□□ -1.55
TTC3-201ENST00000354749 FAM168AQ92567 244 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 FOXF2Q12947 444 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 LYZL1Q6UWQ5 148 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 MDC1Q14676 2089 aaKnown RBP5.37□□□□□ -1.55
TTC3-201ENST00000354749 A8MWP6 167 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 SP9P0CG40 484 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 Q86TA4 180 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 C9orf106Q8NAJ2 232 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 GAGE12BA1L429 117 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 Q0VG73 95 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 LYPD1Q8N2G4 141 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 ARHGEF17Q96PE2 2063 aaPredicted RBP5.37□□□□□ -1.55
TTC3-201ENST00000354749 TIMM23O14925 209 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 CHAC1Q9BUX1 264 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 MBNL3Q9NUK0 354 aaKnown RBP5.37□□□□□ -1.55
TTC3-201ENST00000354749 POLEQ07864 2286 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 ZNF664Q8N3J9 261 aa5.37□□□□□ -1.55
TTC3-201ENST00000354749 NAA38Q9BRA0 125 aaKnown RBP5.36□□□□□ -1.55
TTC3-201ENST00000354749 A0A087X0K7 114 aa5.36□□□□□ -1.55
TTC3-201ENST00000354749 TOMM40O96008 361 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms