RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 Q6ZWC4 215 aa17.64■□□□□ 0.41
UPF3A-201ENST00000351487 WIPF2Q8TF74 440 aaPredicted RBP17.64■□□□□ 0.41
UPF3A-201ENST00000351487 GNB4Q9HAV0 340 aa17.64■□□□□ 0.41
UPF3A-201ENST00000351487 F2Z2F3 143 aa17.63■□□□□ 0.41
UPF3A-201ENST00000351487 CCL21O00585 134 aa17.63■□□□□ 0.41
UPF3A-201ENST00000351487 NBEAP1P0C6P0 100 aa17.63■□□□□ 0.41
UPF3A-201ENST00000351487 GNG5P63218 68 aa17.63■□□□□ 0.41
UPF3A-201ENST00000351487 FAM168AQ92567 244 aa17.63■□□□□ 0.41
UPF3A-201ENST00000351487 CA1P00915 261 aaPredicted RBP17.63■□□□□ 0.41
UPF3A-201ENST00000351487 MRPL54Q6P161 138 aaKnown RBP17.63■□□□□ 0.41
UPF3A-201ENST00000351487 GRAMD2BQ96HH9 432 aa17.63■□□□□ 0.41
UPF3A-201ENST00000351487 CHRDL1Q9BU40 450 aa17.63■□□□□ 0.41
UPF3A-201ENST00000351487 POLR3KQ9Y2Y1 108 aaPredicted RBP17.63■□□□□ 0.41
UPF3A-201ENST00000351487 SLC25A5P05141 298 aaKnown RBP17.62■□□□□ 0.41
UPF3A-201ENST00000351487 IGLC1P0CG04 106 aa17.62■□□□□ 0.41
UPF3A-201ENST00000351487 UBE2G1P62253 170 aa17.62■□□□□ 0.41
UPF3A-201ENST00000351487 NUDT10Q8NFP7 164 aa17.62■□□□□ 0.41
UPF3A-201ENST00000351487 NUDT11Q96G61 164 aa17.62■□□□□ 0.41
UPF3A-201ENST00000351487 IGHV3-21A0A0B4J1V1 117 aa17.62■□□□□ 0.41
UPF3A-201ENST00000351487 KIR2DL5BA0A0G2JN68 375 aa17.62■□□□□ 0.41
UPF3A-201ENST00000351487 KIR2DL5BA0A0G2JPC4 375 aa17.62■□□□□ 0.41
UPF3A-201ENST00000351487 I3L2K1 104 aa17.62■□□□□ 0.41
UPF3A-201ENST00000351487 BMPR1BO00238 502 aa17.62■□□□□ 0.41
UPF3A-201ENST00000351487 KIR2DL5AQ8N109 375 aa17.62■□□□□ 0.41
UPF3A-201ENST00000351487 BLNKQ8WV28 456 aa17.62■□□□□ 0.41
UPF3A-201ENST00000351487 ONECUT1Q9UBC0 465 aa17.62■□□□□ 0.41
UPF3A-201ENST00000351487 PGPA6NDG6 321 aa17.61■□□□□ 0.41
UPF3A-201ENST00000351487 UCNP55089 124 aa17.61■□□□□ 0.41
UPF3A-201ENST00000351487 LDLRAD2Q5SZI1 272 aa17.61■□□□□ 0.41
UPF3A-201ENST00000351487 C1orf194Q5T5A4 169 aa17.61■□□□□ 0.41
UPF3A-201ENST00000351487 C5orf17Q8NAS9 161 aa17.61■□□□□ 0.41
UPF3A-201ENST00000351487 ATG101Q9BSB4 218 aa17.61■□□□□ 0.41
UPF3A-201ENST00000351487 SSBP3Q9BWW4 388 aaPredicted RBP17.61■□□□□ 0.41
UPF3A-201ENST00000351487 USF2Q15853 346 aaPredicted RBP17.6■□□□□ 0.41
UPF3A-201ENST00000351487 TPTE2P1Q5T6R2 138 aa17.6■□□□□ 0.41
UPF3A-201ENST00000351487 LINC00469Q8N7U9 141 aa17.6■□□□□ 0.41
UPF3A-201ENST00000351487 OR11H6Q8NGC7 330 aa17.6■□□□□ 0.41
UPF3A-201ENST00000351487 RAB1BQ9H0U4 201 aa17.6■□□□□ 0.41
UPF3A-201ENST00000351487 SNRPCP09234 159 aaKnown RBP17.6■□□□□ 0.41
UPF3A-201ENST00000351487 HIST1H1EP10412 219 aaKnown RBP17.6■□□□□ 0.41
UPF3A-201ENST00000351487 BRS3P32247 399 aa17.6■□□□□ 0.41
UPF3A-201ENST00000351487 LBHQ53QV2 105 aaPredicted RBP17.6■□□□□ 0.41
UPF3A-201ENST00000351487 HSPB9Q9BQS6 159 aa17.6■□□□□ 0.41
UPF3A-201ENST00000351487 HIGD1AQ9Y241 93 aa17.6■□□□□ 0.41
UPF3A-201ENST00000351487 TPRP12270 2363 aaKnown RBP17.59■□□□□ 0.41
UPF3A-201ENST00000351487 TIMM23O14925 209 aa17.59■□□□□ 0.41
UPF3A-201ENST00000351487 ADORA2A-AS1P86434 159 aa17.59■□□□□ 0.41
UPF3A-201ENST00000351487 GPR82Q96P67 336 aa17.59■□□□□ 0.41
UPF3A-201ENST00000351487 MLST8Q9BVC4 326 aa17.59■□□□□ 0.41
UPF3A-201ENST00000351487 GSX1Q9H4S2 264 aaPredicted RBP17.59■□□□□ 0.41
UPF3A-201ENST00000351487 ZNF331Q9NQX6 463 aaPredicted RBP17.59■□□□□ 0.41
UPF3A-201ENST00000351487 PSG1P11464 419 aa17.59■□□□□ 0.41
UPF3A-201ENST00000351487 KLRB1Q12918 225 aa17.59■□□□□ 0.41
UPF3A-201ENST00000351487 PLGLAQ15195 96 aa17.59■□□□□ 0.41
UPF3A-201ENST00000351487 TSKUQ8WUA8 353 aa17.59■□□□□ 0.41
UPF3A-201ENST00000351487 SAMD10Q9BYL1 202 aa17.59■□□□□ 0.41
UPF3A-201ENST00000351487 ABCA4P78363 2273 aa17.58■□□□□ 0.41
UPF3A-201ENST00000351487 HTR1DP28221 377 aa17.58■□□□□ 0.4
UPF3A-201ENST00000351487 CDSNQ15517 529 aa17.58■□□□□ 0.4
UPF3A-201ENST00000351487 KIAA1644Q3SXP7 199 aa17.58■□□□□ 0.4
UPF3A-201ENST00000351487 LHFPL4Q7Z7J7 247 aa17.58■□□□□ 0.4
UPF3A-201ENST00000351487 NUP35Q8NFH5 326 aa17.58■□□□□ 0.4
UPF3A-201ENST00000351487 FMC1Q96HJ9 113 aa17.58■□□□□ 0.4
UPF3A-201ENST00000351487 TBX15Q96SF7 602 aa17.58■□□□□ 0.4
UPF3A-201ENST00000351487 TMEM14CQ9P0S9 112 aa17.58■□□□□ 0.4
UPF3A-201ENST00000351487 TOMM40O96008 361 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 ASPHD1Q5U4P2 390 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 ZNF600Q6ZNG1 722 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 TIMD4Q96H15 378 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 WNT10AQ9GZT5 417 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 Q9H3A6 140 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 DPM3Q9P2X0 92 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 APCSP02743 223 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 GPX1P07203 203 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 SRIP30626 198 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 MMDQ15546 238 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 PRR27Q6MZM9 219 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 CFHR4Q92496 578 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 KCNS1Q96KK3 526 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 SPTA1P02549 2419 aa17.57■□□□□ 0.4
UPF3A-201ENST00000351487 LTAP01374 205 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 LYZP61626 148 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 LEMD1Q68G75 181 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 TEX43Q6ZNM6 134 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 CBLN4Q9NTU7 201 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 LY6HO94772 140 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 TCRAP04437 139 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 CD33P20138 364 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 SLAQ13239 276 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 C11orf71Q6IPW1 123 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 SIGLECL1Q8N7X8 197 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 RASL11BQ9BPW5 248 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 C2orf88Q9BSF0 95 aa17.56■□□□□ 0.4
UPF3A-201ENST00000351487 SLC25A39Q9BZJ4 359 aaPredicted RBP17.56■□□□□ 0.4
UPF3A-201ENST00000351487 ZNF705FA8MVS1 300 aaPredicted RBP17.55■□□□□ 0.4
UPF3A-201ENST00000351487 M0R1W7 72 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 NBR2O15453 112 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 ZNF253O75346 499 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 NDUFA3O95167 84 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 IGKV1-17P01599 117 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms