RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 FXYD5Q96DB9 178 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 PERPQ96FX8 193 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 UHRF2Q96PU4 802 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 SSX3Q99909 188 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 PYGO2Q9BRQ0 406 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 FAM103A1Q9BTL3 118 aaKnown RBP5.45□□□□□ -1.54
TRIM55-203ENST00000350034 DERL1Q9BUN8 251 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 MEGF9Q9H1U4 602 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 MRPL27Q9P0M9 148 aaKnown RBP5.45□□□□□ -1.54
TRIM55-203ENST00000350034 LY96Q9Y6Y9 160 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 TRBV24-1A0A075B6N3 115 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 IGHV3-21A0A0B4J1V1 117 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 NCBP2LA6PVI3 153 aaKnown RBP5.44□□□□□ -1.54
TRIM55-203ENST00000350034 GGTLC3B5MD39 225 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 F8W735 103 aaPredicted RBP5.44□□□□□ -1.54
TRIM55-203ENST00000350034 WIPF1O43516 503 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 OR7C2O60412 319 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 HYPMO75409 117 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 TOMM40O96008 361 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 MSMBP08118 114 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 CXCL1P09341 107 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 PSG1P11464 419 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 SLC25A16P16260 332 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 FCGR2BP31994 310 aaPredicted RBP5.44□□□□□ -1.54
TRIM55-203ENST00000350034 CRIP2P52943 208 aaPredicted RBP5.44□□□□□ -1.54
TRIM55-203ENST00000350034 YPEL3P61236 119 aaPredicted RBP5.44□□□□□ -1.54
TRIM55-203ENST00000350034 ADIRFQ15847 76 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 TIGITQ495A1 244 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 C16orf82Q7Z2V1 217 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 STXBP6Q8NFX7 210 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 OR5AU1Q8NGC0 362 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 SGMS2Q8NHU3 365 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 FAM110DQ8TAY7 271 aaPredicted RBP5.44□□□□□ -1.54
TRIM55-203ENST00000350034 C2CD4CQ8TF44 421 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 NRGNQ92686 78 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 ANAPC16Q96DE5 110 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 TMEM68Q96MH6 324 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 HSPB9Q9BQS6 159 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 PAXXQ9BUH6 204 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 OR51M1Q9H341 326 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 GSX1Q9H4S2 264 aaPredicted RBP5.44□□□□□ -1.54
TRIM55-203ENST00000350034 TMEM14CQ9P0S9 112 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 MLXQ9UH92 298 aa5.44□□□□□ -1.54
TRIM55-203ENST00000350034 JMJD1CQ15652 2540 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 TRAV30A0A087WSZ9 112 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 TGIF2-C20orf24A0A0A6YYL0 155 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 TRAV20A0A0B4J274 112 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 WI2-2373I1.2A0A1W2PRP0 233 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 C1orf196B1AJZ1 125 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 B4DSR2 109 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 H7BYZ3 331 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 NDUFB8O95169 186 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 FABP1P07148 127 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 OR10J4P0C629 311 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 RD3LP0DJH9 198 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 PYYP10082 97 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 GP9P14770 177 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 HIST1H1BP16401 226 aaKnown RBP5.43□□□□□ -1.54
TRIM55-203ENST00000350034 ORM2P19652 201 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 GATA3P23771 443 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 CRYBB3P26998 211 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 MFAP4P55083 255 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 RAB5BP61020 215 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 UBE2L3P68036 154 aaKnown RBP5.43□□□□□ -1.54
TRIM55-203ENST00000350034 C19orf54Q5BKX5 351 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 KLF17Q5JT82 389 aaPredicted RBP5.43□□□□□ -1.54
TRIM55-203ENST00000350034 LINC00305Q7Z4B0 112 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 C5orf56Q8N8D9 126 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 OR1B1Q8NGR6 318 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 VN1R17PQ8TDU5 208 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 RBM14Q96PK6 669 aaKnown RBP5.43□□□□□ -1.54
TRIM55-203ENST00000350034 TXN2Q99757 166 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 RASL11BQ9BPW5 248 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 TCEAL7Q9BRU2 100 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 ELOVL1Q9BW60 279 aa5.43□□□□□ -1.54
TRIM55-203ENST00000350034 PLXNB1O43157 2135 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 TRBV9A0A0B4J1U6 114 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 TRAV40A0A0B4J280 105 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 A0A0U1RQK1 487 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 H3BRN7 92 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 PHOX2AO14813 284 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 PPP1R2P9O14990 202 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 ATP6V0E1O15342 81 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 TGOLN2O43493 480 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 GGCTO75223 188 aaKnown RBP5.42□□□□□ -1.54
TRIM55-203ENST00000350034 AMY1AP04745 511 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 IGHV4-38-2P0DP08 117 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 SRP14P37108 136 aaKnown RBP5.42□□□□□ -1.54
TRIM55-203ENST00000350034 RPL35P42766 123 aaKnown RBP5.42□□□□□ -1.54
TRIM55-203ENST00000350034 TAS2R60P59551 318 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 SUMO1P63165 101 aaKnown RBP5.42□□□□□ -1.54
TRIM55-203ENST00000350034 CLEC12BQ2HXU8 276 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 ZNF329Q86UD4 541 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 ZNF491Q8N8L2 437 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 OCC1Q8TAD7 63 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 TMEM190Q8WZ59 177 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 ZNF414Q96IQ9 312 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 FAM210BQ96KR6 192 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 IMMP2LQ96T52 175 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 SHANK2-AS3Q9BTD1 123 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms