RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 OR5B3Q8NH48 314 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 SLC35E1Q96K37 410 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 COMMD5Q9GZQ3 224 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 FKBP11Q9NYL4 201 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 SMIM27A0A1W2PRY6 76 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 CRYABP02511 175 aaKnown RBP4.81□□□□□ -1.64
CLCN3-201ENST00000347613 C8orf88P0DMB2 117 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 IRF2P14316 349 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 CX3CL1P78423 397 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 RNF152Q8N8N0 203 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 OSR1Q8TAX0 266 aaPredicted RBP4.81□□□□□ -1.64
CLCN3-201ENST00000347613 TBX15Q96SF7 602 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 HSPB9Q9BQS6 159 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 DNAJC4Q9NNZ3 241 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 CDC42EP3Q9UKI2 254 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 HIVEP3Q5T1R4 2406 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 A0A1W2PRD5 423 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 A0A1W2PRF3 423 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 A0A1W2PRM7 423 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 A0A1W2PS18 150 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 SH2D7A6NKC9 451 aaPredicted RBP4.8□□□□□ -1.64
CLCN3-201ENST00000347613 TGOLN2O43493 480 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 GATCO43716 136 aaKnown RBP4.8□□□□□ -1.64
CLCN3-201ENST00000347613 PRRX1P54821 245 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 CASP6P55212 293 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 FOXC1Q12948 553 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 KLRD1Q13241 179 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 PRR27Q6MZM9 219 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 TGIF2LXQ8IUE1 241 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 DYNAPQ8N1N2 210 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 NUDT10Q8NFP7 164 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 OR4C13Q8NGP0 309 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 NUDT11Q96G61 164 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 ADTRPQ96IZ2 230 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 MS4A10Q96PG2 267 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 NEU1Q99519 415 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 SCNM1Q9BWG6 230 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 FBXL15Q9H469 300 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 IGHV2-26A0A0B4J1V2 119 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 CDKN1BP46527 198 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 UBE2L3P68036 154 aaKnown RBP4.8□□□□□ -1.64
CLCN3-201ENST00000347613 RPEL1Q2QD12 228 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 SAPCD1Q5SSQ6 148 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 CYB5R2Q6BCY4 276 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 NIT1Q86X76 327 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 CMTM2Q8TAZ6 248 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 GTSF1Q8WW33 167 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 NAGKQ9UJ70 344 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 TCRBV4S1A1TA0A5B7 111 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 PRRG2O14669 202 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 NDUFB3O43676 98 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 CRYGCP07315 174 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 CRISP2P16562 243 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 TNFRSF1AP19438 455 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 COX7A1P24310 79 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF137PP52743 207 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 SELENOVP59797 346 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 MEF2CQ06413 473 aaPredicted RBP4.8□□□□□ -1.64
CLCN3-201ENST00000347613 PMCHL1Q16048 86 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 IBA57Q5T440 356 aaKnown RBP4.8□□□□□ -1.64
CLCN3-201ENST00000347613 NUP35Q8NFH5 326 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 OR1B1Q8NGR6 318 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 VN1R17PQ8TDU5 208 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 TMEM18Q96B42 140 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 GAL3ST2Q9H3Q3 398 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 RPH3ALQ9UNE2 315 aa4.8□□□□□ -1.64
CLCN3-201ENST00000347613 IGHV1-3A0A0C4DH29 117 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 IGHV1-69-2A0A0G2JMI3 117 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 FNDC10F2Z333 226 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 NDUFS7O75251 213 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 FOXE3Q13461 319 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 TNXAQ16473 311 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 DNLZQ5SXM8 178 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 PVRIGQ6DKI7 326 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 LCN12Q6JVE5 192 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 ATOH7Q8N100 152 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 EXOC3-AS1Q8N2X6 119 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 THAP8Q8NA92 274 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 NDUFAF3Q9BU61 184 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 TMEM133Q9H2Q1 129 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 SERTAD4Q9NUC0 356 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 AMMECR1Q9Y4X0 333 aaPredicted RBP4.79□□□□□ -1.64
CLCN3-201ENST00000347613 NIPBLQ6KC79 2804 aaeCLIP4.79□□□□□ -1.64
CLCN3-201ENST00000347613 KIR2DL5BA0A0G2JN68 375 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 KIR2DL5BA0A0G2JPC4 375 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 GPX1P07203 203 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 GP9P14770 177 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 SRIP30626 198 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 C10orf113Q5VZT2 155 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 LINC00173Q6ZV60 143 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 KIR2DL5AQ8N109 375 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF414Q96IQ9 312 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 SPXQ9BT56 116 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 PAXXQ9BUH6 204 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 NAT8BQ9UHF3 227 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 SIGLEC9Q9Y336 463 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 WASHC3Q9Y3C0 194 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 PAM16Q9Y3D7 125 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 ABCA2Q9BZC7 2435 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 A0A1W2PRE2 83 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms