RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 ACTR3CQ9C0K3 210 aaPredicted RBP12.66□□□□□ -0.38
CEACAM1-202ENST00000344391 HRH4Q9H3N8 390 aa12.66□□□□□ -0.38
CEACAM1-202ENST00000344391 CTXND1A0A1B0GTU2 59 aa12.65□□□□□ -0.38
CEACAM1-202ENST00000344391 NUPL2O15504 423 aaKnown RBP12.65□□□□□ -0.38
CEACAM1-202ENST00000344391 TGOLN2O43493 480 aa12.65□□□□□ -0.38
CEACAM1-202ENST00000344391 CDC34P49427 236 aaPredicted RBP12.65□□□□□ -0.38
CEACAM1-202ENST00000344391 NDUFA5Q16718 116 aa12.65□□□□□ -0.38
CEACAM1-202ENST00000344391 SPSB3Q6PJ21 355 aa12.65□□□□□ -0.38
CEACAM1-202ENST00000344391 PATE2Q6UY27 113 aa12.65□□□□□ -0.38
CEACAM1-202ENST00000344391 MYOZ3Q8TDC0 251 aa12.65□□□□□ -0.38
CEACAM1-202ENST00000344391 SFT2D1Q8WV19 159 aa12.65□□□□□ -0.38
CEACAM1-202ENST00000344391 SLC25A22Q9H936 323 aa12.65□□□□□ -0.38
CEACAM1-202ENST00000344391 DNAJC4Q9NNZ3 241 aa12.65□□□□□ -0.38
CEACAM1-202ENST00000344391 MED9Q9NWA0 146 aa12.65□□□□□ -0.38
CEACAM1-202ENST00000344391 SETD2Q9BYW2 2564 aaPredicted RBP12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 TEP1Q99973 2627 aaKnown RBP12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 IGHV3-11P01762 117 aa12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 RPLP1P05386 114 aaKnown RBP12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 ZNF343Q6P1L6 599 aa12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 COMMD1Q8N668 190 aa12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 KLHDC1Q8N7A1 406 aa12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 OR51G1Q8NGK1 321 aa12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 OR1L4Q8NGR5 311 aa12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 GATAD1Q8WUU5 269 aa12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 RAB24Q969Q5 203 aa12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 ZNF414Q96IQ9 312 aa12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 PFDN5Q99471 154 aa12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 SEPSECSQ9HD40 501 aaKnown RBP12.64□□□□□ -0.39
CEACAM1-202ENST00000344391 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 TRAV1-1A0A0B4J248 108 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 A0A1W2PPV4 95 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 COX7A2P2O60397 106 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 EIF3GO75821 320 aaKnown RBP eCLIP12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 NDUFA7O95182 113 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 OR2C1O95371 312 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 OR5G3P0C626 314 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 RHOBP62745 196 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 FAM78BQ5VT40 261 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 LCN15Q6UWW0 184 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 SLC7A5P1Q8MH63 180 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 ZNF491Q8N8L2 437 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 OR4X2Q8NGF9 303 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 LINC01006Q8NI28 216 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 WIPF2Q8TF74 440 aaPredicted RBP12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 Q8WTZ3 238 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 DOK5Q9P104 306 aa12.63□□□□□ -0.39
CEACAM1-202ENST00000344391 ELOA3CA0A087WX78 387 aaPredicted RBP12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 WI2-2373I1.2A0A1W2PRP0 233 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 MAP1LC3B2A6NCE7 125 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 ORM2P19652 201 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 SPATA31B1PQ5VZV4 182 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 ZNF600Q6ZNG1 722 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 OR1B1Q8NGR6 318 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 MAP1LC3BQ9GZQ8 125 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 PFDN2Q9UHV9 154 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 FUT9Q9Y231 359 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 A0A1B0GV50 99 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 PPP5D1E7EU14 171 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 HMGB3O15347 200 aaKnown RBP12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 HYPMO75409 117 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 TRBV12-3P01733 135 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 HBE1P02100 147 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 LYZP61626 148 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 CCL20P78556 96 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 C10orf113Q5VZT2 155 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 OR5AU1Q8NGC0 362 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 RNF125Q96EQ8 232 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 RNF2Q99496 336 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 C2CD3Q4AC94 2353 aa12.62□□□□□ -0.39
CEACAM1-202ENST00000344391 IL4P05112 153 aa12.61□□□□□ -0.39
CEACAM1-202ENST00000344391 STAG3L2P0CL84 134 aa12.61□□□□□ -0.39
CEACAM1-202ENST00000344391 STAG3L3P0CL85 134 aa12.61□□□□□ -0.39
CEACAM1-202ENST00000344391 ARL3P36405 182 aa12.61□□□□□ -0.39
CEACAM1-202ENST00000344391 FGF8P55075 233 aaPredicted RBP12.61□□□□□ -0.39
CEACAM1-202ENST00000344391 MIR17HGQ75NE6 70 aa12.61□□□□□ -0.39
CEACAM1-202ENST00000344391 UBE2E2Q96LR5 201 aa12.61□□□□□ -0.39
CEACAM1-202ENST00000344391 MRPL32Q9BYC8 188 aaKnown RBP12.61□□□□□ -0.39
CEACAM1-202ENST00000344391 GNB4Q9HAV0 340 aa12.61□□□□□ -0.39
CEACAM1-202ENST00000344391 MRPL27Q9P0M9 148 aaKnown RBP12.61□□□□□ -0.39
CEACAM1-202ENST00000344391 PUS1Q9Y606 427 aaKnown RBP eCLIP12.61□□□□□ -0.39
CEACAM1-202ENST00000344391 ANKRD34BA5PLL1 514 aa12.6□□□□□ -0.39
CEACAM1-202ENST00000344391 TCTEX1D4Q5JR98 221 aa12.6□□□□□ -0.39
CEACAM1-202ENST00000344391 FAM209BQ5JX69 171 aa12.6□□□□□ -0.39
CEACAM1-202ENST00000344391 IL34Q6ZMJ4 242 aa12.6□□□□□ -0.39
CEACAM1-202ENST00000344391 LINC00305Q7Z4B0 112 aa12.6□□□□□ -0.39
CEACAM1-202ENST00000344391 COMMD7Q86VX2 200 aa12.6□□□□□ -0.39
CEACAM1-202ENST00000344391 MARC2Q969Z3 335 aa12.6□□□□□ -0.39
CEACAM1-202ENST00000344391 UHRF2Q96PU4 802 aa12.6□□□□□ -0.39
CEACAM1-202ENST00000344391 PBDC1Q9BVG4 233 aa12.6□□□□□ -0.39
CEACAM1-202ENST00000344391 IGHV3-35A0A0C4DH35 117 aa12.59□□□□□ -0.39
CEACAM1-202ENST00000344391 NUDT19A8MXV4 375 aa12.59□□□□□ -0.39
CEACAM1-202ENST00000344391 SRSF2Q01130 221 aaKnown RBP12.59□□□□□ -0.39
CEACAM1-202ENST00000344391 RELQ04864 619 aaPredicted RBP12.59□□□□□ -0.39
CEACAM1-202ENST00000344391 USF2Q15853 346 aaPredicted RBP12.59□□□□□ -0.39
CEACAM1-202ENST00000344391 MORN5Q5VZ52 161 aa12.59□□□□□ -0.39
CEACAM1-202ENST00000344391 TOMM20LQ6UXN7 152 aa12.59□□□□□ -0.39
CEACAM1-202ENST00000344391 OR4F5Q8NH21 305 aa12.59□□□□□ -0.39
CEACAM1-202ENST00000344391 ZFAND3Q9H8U3 227 aa12.59□□□□□ -0.39
CEACAM1-202ENST00000344391 PEF1Q9UBV8 284 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms