RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TMEM50AO95807 157 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 SLC25A6P12236 298 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 CLDN17P56750 224 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 C1orf229Q6ZS94 237 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-202ENST00000343599 ARHGAP5-AS1Q96IT6 56 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 TP73-AS1Q9UF72 201 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 IGHV1-69DA0A0B4J2H0 117 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 hCG_38984A0A1B0GV85 526 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 LOC107986453A0A1B0GWG9 222 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 A6NDN8 102 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 C2orf70A6NJV1 201 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 SSSCA1O60232 199 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 IGHV1-69P01742 117 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 IGHG4P01861 327 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 NPPCP23582 126 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 UBE2G1P62253 170 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 RPL24P83731 157 aaKnown RBP5.88□□□□□ -1.47
ZNF540-202ENST00000343599 KLK9Q2XQG4 91 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 KLF17Q5JT82 389 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-202ENST00000343599 EBLN2Q6P2I7 272 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 OR52E5Q8NH55 327 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 APOBEC3DQ96AK3 386 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-202ENST00000343599 AP1S3Q96PC3 154 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 IL36BQ9NZH7 164 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 KLK9Q9UKQ9 250 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 UFC1Q9Y3C8 167 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 CMYA5Q8N3K9 4069 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 A0A0G2JLM5 398 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 A0A1W2PPM0 123 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 TNFSF12O43508 249 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 GPR183P32249 361 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 CXorf66Q5JRM2 361 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-202ENST00000343599 LCNL1Q6ZST4 164 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 ZNF439Q8NDP4 499 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 LHX4Q969G2 390 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 PMCHL2Q9BQD1 86 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 SSBP3Q9BWW4 388 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-202ENST00000343599 SPANXB1Q9NS25 103 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-202ENST00000343599 R4GMQ9 66 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 LYZL6O75951 148 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 RPS27P42677 84 aaKnown RBP5.87□□□□□ -1.47
ZNF540-202ENST00000343599 ARFRP1Q13795 201 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 SMIM20Q8N5G0 67 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 GRAMD2BQ96HH9 432 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 SPIN2AQ99865 258 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 SPIN2BQ9BPZ2 258 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 QTRT1Q9BXR0 403 aaKnown RBP5.87□□□□□ -1.47
ZNF540-202ENST00000343599 HSPB8Q9UJY1 196 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 MYO7BQ6PIF6 2116 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 LRRK2Q5S007 2527 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 PAX9P55771 341 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 ZNF90Q03938 601 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 ESM1Q9NQ30 184 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 SPCS1Q9Y6A9 102 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 CFAP47Q6ZTR5 3102 aa5.87□□□□□ -1.47
ZNF540-202ENST00000343599 DNHD1Q96M86 4753 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 LRP5LA4QPB2 252 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 SNURFLB1AK76 121 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 H3BUT2 72 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 SERPINE2P07093 398 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 ZNF20P17024 532 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 TCTAP57738 103 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 RPL11P62913 178 aaKnown RBP5.86□□□□□ -1.47
ZNF540-202ENST00000343599 LRRC75BQ2VPJ9 315 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 ABCA11PQ4W5N1 156 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 Q56UQ5 140 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 KCTD18Q6PI47 426 aaPredicted RBP5.86□□□□□ -1.47
ZNF540-202ENST00000343599 C2orf91Q6ZV80 131 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 TTC9CQ8N5M4 171 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 SCGB1C1Q8TD33 95 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 MS4A6AQ9H2W1 248 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 SLC39A9Q9NUM3 307 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 UTP20O75691 2785 aaKnown RBP5.86□□□□□ -1.47
ZNF540-202ENST00000343599 TET2Q6N021 2002 aaPredicted RBP5.86□□□□□ -1.47
ZNF540-202ENST00000343599 IGKV1D-8A0A087WSZ0 117 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 MDFIC2A0A1B0GVS7 189 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 FBLL1A6NHQ2 334 aaKnown RBP5.86□□□□□ -1.47
ZNF540-202ENST00000343599 TMEM97Q5BJF2 176 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 SLC35E4Q6ICL7 350 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 GLIPR1L1Q6UWM5 242 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 FAM19A2Q8N3H0 131 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 CYYR1Q96J86 154 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 TMEM59Q9BXS4 323 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 OR2H1Q9GZK4 316 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 SERTAD4Q9NUC0 356 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 LIN7CQ9NUP9 197 aaKnown RBP5.86□□□□□ -1.47
ZNF540-202ENST00000343599 DNAH1Q9P2D7 4330 aa5.86□□□□□ -1.47
ZNF540-202ENST00000343599 A0A087X0K7 114 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 SHISA8B8ZZ34 492 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 MPIG6BO95866 241 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 HTR1DP28221 377 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 ACSM6Q6P461 480 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 TMEM136Q6ZRR5 245 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 ZAR1Q86SH2 424 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 RPP25LQ8N5L8 163 aaKnown RBP5.85□□□□□ -1.47
ZNF540-202ENST00000343599 OR11H6Q8NGC7 330 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 LSM10Q969L4 123 aaKnown RBP5.85□□□□□ -1.47
ZNF540-202ENST00000343599 NDFIP1Q9BT67 221 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 OR2D2Q9H210 308 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 SAP30LQ9HAJ7 183 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms