RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 THBDP07204 575 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 CELA3AP09093 270 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 HLA-DRB4P13762 266 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 FOXA3P55318 350 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-201ENST00000343524 GFERP55789 205 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 C1orf122Q6ZSJ8 110 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 AAED1Q7RTV5 226 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 RPS19BP1Q86WX3 136 aaKnown RBP6.64□□□□□ -1.35
ATG4A-201ENST00000343524 Q8N3U1 123 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 FAM168AQ92567 244 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 SPAG8Q99932 426 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-201ENST00000343524 FGF23Q9GZV9 251 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-201ENST00000343524 HLA-DRB4X5D2U9 266 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 ARHGEF17Q96PE2 2063 aaPredicted RBP6.63□□□□□ -1.35
ATG4A-201ENST00000343524 SDK1Q7Z5N4 2213 aa6.63□□□□□ -1.35
ATG4A-201ENST00000343524 A0A1W2PQF6 199 aa6.63□□□□□ -1.35
ATG4A-201ENST00000343524 ZNF716A6NP11 495 aa6.63□□□□□ -1.35
ATG4A-201ENST00000343524 VWC2LB2RUY7 222 aa6.63□□□□□ -1.35
ATG4A-201ENST00000343524 ACTL6BO94805 426 aa6.63□□□□□ -1.35
ATG4A-201ENST00000343524 OR2H2O95918 312 aa6.63□□□□□ -1.35
ATG4A-201ENST00000343524 TAL2Q16559 108 aa6.63□□□□□ -1.35
ATG4A-201ENST00000343524 C16orf47Q6ZP98 133 aaPredicted RBP6.63□□□□□ -1.35
ATG4A-201ENST00000343524 FAM214BQ7L5A3 538 aa6.63□□□□□ -1.35
ATG4A-201ENST00000343524 NAA38Q9BRA0 125 aaKnown RBP6.63□□□□□ -1.35
ATG4A-201ENST00000343524 RTL8AQ9BWD3 113 aa6.63□□□□□ -1.35
ATG4A-201ENST00000343524 SPTAN1Q13813 2472 aaKnown RBP6.63□□□□□ -1.35
ATG4A-201ENST00000343524 IGLV3-12A0A075B6K2 115 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 IGHV3-15A0A0B4J1V0 119 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-201ENST00000343524 E9PLD3 99 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 AGFG2O95081 481 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 NGFP01138 241 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 P01737 135 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 SPINK8P0C7L1 97 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 OR1C1Q15619 314 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 GAGE13Q4V321 117 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 PPP1R32Q7Z5V6 425 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 GATD1Q8NB37 220 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 OR1L4Q8NGR5 311 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 DAZAP1Q96EP5 407 aaKnown RBP6.62□□□□□ -1.35
ATG4A-201ENST00000343524 RAX2Q96IS3 184 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 C7orf69Q9H7B7 122 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 PSG8Q9UQ74 426 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 TCF19Q9Y242 345 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 UBR5O95071 2799 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-201ENST00000343524 NCKAP5O14513 1909 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 IGHV3-20A0A0C4DH32 117 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 MGST3O14880 152 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 SNAI2O43623 268 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 SS18L1O75177 396 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-201ENST00000343524 APOMO95445 188 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 APOHP02749 345 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-201ENST00000343524 GCSHP23434 173 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 TCTAP57738 103 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 C1orf61Q13536 156 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 ZNF146Q15072 292 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 INO80CQ6PI98 192 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-201ENST00000343524 PRSS3P2Q8NHM4 247 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 NEU4Q8WWR8 484 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-201ENST00000343524 FMC1Q96HJ9 113 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 ANAPC13Q9BS18 74 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 SLC25A33Q9BSK2 321 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 C1QTNF4Q9BXJ3 329 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 PLA2G2FQ9BZM2 168 aa6.62□□□□□ -1.35
ATG4A-201ENST00000343524 C15orf61A6NNL5 157 aa6.61□□□□□ -1.35
ATG4A-201ENST00000343524 VSTM5A8MXK1 200 aa6.61□□□□□ -1.35
ATG4A-201ENST00000343524 BRWD1-AS2P59051 145 aa6.61□□□□□ -1.35
ATG4A-201ENST00000343524 SRYQ05066 204 aa6.61□□□□□ -1.35
ATG4A-201ENST00000343524 RIGQ13278 110 aa6.61□□□□□ -1.35
ATG4A-201ENST00000343524 Q6AWC8 147 aa6.61□□□□□ -1.35
ATG4A-201ENST00000343524 ZNF329Q86UD4 541 aa6.61□□□□□ -1.35
ATG4A-201ENST00000343524 PLXDC1Q8IUK5 500 aa6.61□□□□□ -1.35
ATG4A-201ENST00000343524 ZNF503Q96F45 646 aa6.61□□□□□ -1.35
ATG4A-201ENST00000343524 ZNF714Q96N38 554 aa6.61□□□□□ -1.35
ATG4A-201ENST00000343524 TM2D2Q9BX73 214 aa6.61□□□□□ -1.35
ATG4A-201ENST00000343524 FOXA2Q9Y261 457 aaPredicted RBP6.61□□□□□ -1.35
ATG4A-201ENST00000343524 ASCC3Q8N3C0 2202 aaKnown RBP6.61□□□□□ -1.35
ATG4A-201ENST00000343524 KIAA1549Q9HCM3 1950 aa6.61□□□□□ -1.35
ATG4A-201ENST00000343524 COL6A6A6NMZ7 2263 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 LOC102723996A0A087X1L8 192 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 TRBV7-9A0A0J9YWB2 115 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 FBLL1A6NHQ2 334 aaKnown RBP6.6□□□□□ -1.35
ATG4A-201ENST00000343524 C12orf77C9JDV5 145 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 SP1P08047 785 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 PATE4P0C8F1 98 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 LIFP15018 202 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 ARL3P36405 182 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 LYRM7Q5U5X0 104 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 Q6ZR03 302 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 SLC25A48Q6ZT89 311 aaKnown RBP6.6□□□□□ -1.35
ATG4A-201ENST00000343524 BCL6BQ8N143 479 aaPredicted RBP6.6□□□□□ -1.35
ATG4A-201ENST00000343524 OR5AN1Q8NGI8 311 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 COQ2Q96H96 371 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 C1orf159Q96HA4 380 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 ZNF414Q96IQ9 312 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 ZNF488Q96MN9 340 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 CHAC1Q9BUX1 264 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 DEFB126Q9BYW3 111 aa6.6□□□□□ -1.35
ATG4A-201ENST00000343524 PRSS22Q9GZN4 317 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms