RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TRBV6-1A0A0K0K1D8 114 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 CGB1A6NKQ9 187 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 CIDEAO60543 219 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 TCRAP04437 139 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 GP9P14770 177 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 HOXB4P17483 251 aaPredicted RBP7.77□□□□□ -1.17
HOXA1-201ENST00000343060 ACP1P24666 158 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 MSMPQ1L6U9 139 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 Q86TA4 180 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 ZCCHC24Q8N2G6 241 aaKnown RBP7.77□□□□□ -1.17
HOXA1-201ENST00000343060 OR4A5Q8NH83 315 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 MCRIP2Q9BUT9 160 aaKnown RBP7.77□□□□□ -1.17
HOXA1-201ENST00000343060 DKK4Q9UBT3 224 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 DSCAMO60469 2012 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 IGHV1-18A0A0C4DH31 117 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 A6NDN8 102 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 C9orf172C9J069 976 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 PPIAL4DF5H284 164 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 APOBEC3AP31941 199 aaPredicted RBP7.76□□□□□ -1.17
HOXA1-201ENST00000343060 ZNF137PP52743 207 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 PVRIGQ6DKI7 326 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 VHLLQ6RSH7 139 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 BOD1L2Q8IYS8 172 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 TMEM167AQ8TBQ9 72 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 TMEM190Q8WZ59 177 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 AP5S1Q9NUS5 200 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 TM4SF5O14894 197 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 SIVA1O15304 175 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 NCR2O95944 276 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 ZNF138P52744 262 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 RIPPLY3P57055 190 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 WT1-ASQ06250 92 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 HSD52Q0P140 79 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 SPRNQ5BIV9 151 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 PIP4P2Q8N4L2 257 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 FAM169BQ8N8A8 192 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 OR5AN1Q8NGI8 311 aa7.76□□□□□ -1.17
HOXA1-201ENST00000343060 MRPL36Q9P0J6 103 aaKnown RBP7.76□□□□□ -1.17
HOXA1-201ENST00000343060 CACNA1GO43497 2377 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 PATE3B3GLJ2 98 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 E7EUB6 86 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 CRYGCP07315 174 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 SMIM17P0DL12 118 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 CD46P15529 392 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 S100A7P31151 101 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 CSN1S1P47710 185 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 MOGAT3Q86VF5 341 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 TMEM105Q8N8V8 129 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 OR5A1Q8NGJ0 315 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 OR9G4Q8NGQ1 327 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 OR10AG1Q8NH19 301 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 DAZAP1Q96EP5 407 aaKnown RBP7.75□□□□□ -1.17
HOXA1-201ENST00000343060 SGK494Q96LW2 274 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 HARBI1Q96MB7 349 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 TRGV9Q99603 122 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 PCNX2A6NKB5 2137 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 MED13Q9UHV7 2174 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 PRUNE2Q8WUY3 3088 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 A0A096LNJ9 63 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 A0A1B0GW15 77 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 PLAUP00749 431 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 KIR2DL2P43627 348 aaPredicted RBP7.75□□□□□ -1.17
HOXA1-201ENST00000343060 GATA4P43694 442 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 PLP1P60201 277 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 LGALS9BQ3B8N2 356 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 LGALS9CQ6DKI2 356 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 RBMXL3Q8N7X1 1067 aaKnown RBP7.75□□□□□ -1.17
HOXA1-201ENST00000343060 GAFA1Q96PS6 74 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 MRPL20Q9BYC9 149 aaKnown RBP7.75□□□□□ -1.17
HOXA1-201ENST00000343060 Q9H3A6 140 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 RABAC1Q9UI14 185 aa7.75□□□□□ -1.17
HOXA1-201ENST00000343060 FRYLO94915 3013 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 FREM2Q5SZK8 3169 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 C22orf46C9J442 243 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 IGLV2-11P01706 119 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 APOA2P02652 100 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 SUB1P53999 127 aaKnown RBP eCLIP7.74□□□□□ -1.17
HOXA1-201ENST00000343060 DUX4L9Q6RFH8 374 aaPredicted RBP7.74□□□□□ -1.17
HOXA1-201ENST00000343060 LHFPL4Q7Z7J7 247 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 RPRMLQ8N4K4 120 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 BLNKQ8WV28 456 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 ZC2HC1AQ96GY0 325 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 SIT1Q9Y3P8 196 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 A0A1B0GUT8 65 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 SMAD7O15105 426 aaKnown RBP7.74□□□□□ -1.17
HOXA1-201ENST00000343060 IGHG3P01860 377 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 IGFBP4P22692 258 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 KIR3DS1Q14943 382 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 ADAMTSL5Q6ZMM2 481 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 OR2K2Q8NGT1 345 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 OR10X1Q8NGY0 326 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 AP1S3Q96PC3 154 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 OTORQ9NRC9 128 aa7.74□□□□□ -1.17
HOXA1-201ENST00000343060 PRR14LQ5THK1 2151 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 A0A0G2JLM5 398 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 ZNF785A8K8V0 405 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 H0Y8G0 127 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 TMEM11P17152 192 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 COL8A1P27658 744 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 RBPJQ06330 500 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms