RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 TIMM9Q9Y5J7 89 aa10.72□□□□□ -0.69
PMS1-201ENST00000342075 STAB1Q9NY15 2570 aa10.72□□□□□ -0.69
PMS1-201ENST00000342075 TRAV5A0A0B4J249 113 aa10.72□□□□□ -0.69
PMS1-201ENST00000342075 CYB5BO43169 146 aa10.72□□□□□ -0.69
PMS1-201ENST00000342075 ZNF207O43670 478 aaKnown RBP10.72□□□□□ -0.69
PMS1-201ENST00000342075 NPBWR1P48145 328 aa10.72□□□□□ -0.69
PMS1-201ENST00000342075 TMEM41BQ5BJD5 291 aa10.72□□□□□ -0.69
PMS1-201ENST00000342075 EIF5AL1Q6IS14 154 aaKnown RBP10.72□□□□□ -0.69
PMS1-201ENST00000342075 VN1R17PQ8TDU5 208 aa10.72□□□□□ -0.69
PMS1-201ENST00000342075 TRGV9Q99603 122 aa10.72□□□□□ -0.69
PMS1-201ENST00000342075 A0A1W2PRX2 142 aa10.71□□□□□ -0.69
PMS1-201ENST00000342075 FAM223BA6NKX1 122 aa10.71□□□□□ -0.69
PMS1-201ENST00000342075 CD28P10747 220 aa10.71□□□□□ -0.69
PMS1-201ENST00000342075 RAB31Q13636 194 aa10.71□□□□□ -0.69
PMS1-201ENST00000342075 FAM223AQ8IWN6 122 aa10.71□□□□□ -0.69
PMS1-201ENST00000342075 PUS1Q9Y606 427 aaKnown RBP eCLIP10.71□□□□□ -0.69
PMS1-201ENST00000342075 IL4P05112 153 aa10.71□□□□□ -0.69
PMS1-201ENST00000342075 OR5G3P0C626 314 aa10.71□□□□□ -0.69
PMS1-201ENST00000342075 RD3LP0DJH9 198 aa10.71□□□□□ -0.69
PMS1-201ENST00000342075 USF2Q15853 346 aaPredicted RBP10.71□□□□□ -0.69
PMS1-201ENST00000342075 MIR17HGQ75NE6 70 aa10.71□□□□□ -0.69
PMS1-201ENST00000342075 OR51G1Q8NGK1 321 aa10.71□□□□□ -0.69
PMS1-201ENST00000342075 TMPRSS5Q9H3S3 457 aa10.71□□□□□ -0.69
PMS1-201ENST00000342075 IGHV3OR16-13A0A075B7E8 117 aa10.71□□□□□ -0.7
PMS1-201ENST00000342075 IGHV3-74A0A0B4J1X5 117 aa10.71□□□□□ -0.7
PMS1-201ENST00000342075 OR2C1O95371 312 aa10.71□□□□□ -0.7
PMS1-201ENST00000342075 M6PRP20645 277 aa10.71□□□□□ -0.7
PMS1-201ENST00000342075 EDN2P20800 178 aa10.71□□□□□ -0.7
PMS1-201ENST00000342075 SLC35B1P78383 322 aa10.71□□□□□ -0.7
PMS1-201ENST00000342075 SERF2P84101 59 aa10.71□□□□□ -0.7
PMS1-201ENST00000342075 SFT2D1Q8WV19 159 aa10.71□□□□□ -0.7
PMS1-201ENST00000342075 IGHV3-49A0A0A0MS15 119 aa10.7□□□□□ -0.7
PMS1-201ENST00000342075 FAM78BQ5VT40 261 aa10.7□□□□□ -0.7
PMS1-201ENST00000342075 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.7□□□□□ -0.7
PMS1-201ENST00000342075 ZNF491Q8N8L2 437 aa10.7□□□□□ -0.7
PMS1-201ENST00000342075 ZNF580Q9UK33 172 aa10.7□□□□□ -0.7
PMS1-201ENST00000342075 TGOLN2O43493 480 aa10.7□□□□□ -0.7
PMS1-201ENST00000342075 ARL3P36405 182 aa10.7□□□□□ -0.7
PMS1-201ENST00000342075 KRTAP10-3P60369 221 aa10.7□□□□□ -0.7
PMS1-201ENST00000342075 CLLU1Q5K131 121 aa10.7□□□□□ -0.7
PMS1-201ENST00000342075 UNQ9165/PRO28630Q6UXU0 137 aa10.7□□□□□ -0.7
PMS1-201ENST00000342075 RAB24Q969Q5 203 aa10.7□□□□□ -0.7
PMS1-201ENST00000342075 H3BUA1 57 aa10.69□□□□□ -0.7
PMS1-201ENST00000342075 BMPR1BO00238 502 aa10.69□□□□□ -0.7
PMS1-201ENST00000342075 NUPL2O15504 423 aaKnown RBP10.69□□□□□ -0.7
PMS1-201ENST00000342075 HSPB1P04792 205 aaKnown RBP10.69□□□□□ -0.7
PMS1-201ENST00000342075 FOXE3Q13461 319 aa10.69□□□□□ -0.7
PMS1-201ENST00000342075 JMJD8Q96S16 334 aa10.69□□□□□ -0.7
PMS1-201ENST00000342075 RNF114Q9Y508 228 aa10.69□□□□□ -0.7
PMS1-201ENST00000342075 COL6A5A8TX70 2615 aa10.69□□□□□ -0.7
PMS1-201ENST00000342075 TRBV7-1A0A0A6YYK4 115 aa10.69□□□□□ -0.7
PMS1-201ENST00000342075 RAB14P61106 215 aa10.69□□□□□ -0.7
PMS1-201ENST00000342075 SPSB3Q6PJ21 355 aa10.69□□□□□ -0.7
PMS1-201ENST00000342075 WIPF2Q8TF74 440 aaPredicted RBP10.69□□□□□ -0.7
PMS1-201ENST00000342075 IGHV3-66A0A0C4DH42 116 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 PRB4P10163 310 aaPredicted RBP10.68□□□□□ -0.7
PMS1-201ENST00000342075 SRSF3P84103 164 aaKnown RBP10.68□□□□□ -0.7
PMS1-201ENST00000342075 ACOT6Q3I5F7 207 aaPredicted RBP10.68□□□□□ -0.7
PMS1-201ENST00000342075 ZNF343Q6P1L6 599 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 GATAD1Q8WUU5 269 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 UMAD1C9J7I0 102 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 COX7A2P2O60397 106 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 CDC34P49427 236 aaPredicted RBP10.68□□□□□ -0.7
PMS1-201ENST00000342075 TOMM20LQ6UXN7 152 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 IQCF2Q8IXL9 164 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 USMG5Q96IX5 58 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.68□□□□□ -0.7
PMS1-201ENST00000342075 TOMM40O96008 361 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 H2AFB1P0C5Y9 115 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 LINC00305Q7Z4B0 112 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 MYOZ3Q8TDC0 251 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 RNF125Q96EQ8 232 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 CITED2Q99967 270 aaPredicted RBP10.68□□□□□ -0.7
PMS1-201ENST00000342075 C20orf24Q9BUV8 137 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 SCRT1Q9BWW7 348 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 C16orf95Q9H693 158 aa10.68□□□□□ -0.7
PMS1-201ENST00000342075 IGHV4OR15-8A0A075B7B6 117 aa10.67□□□□□ -0.7
PMS1-201ENST00000342075 A0A087WW49 117 aa10.67□□□□□ -0.7
PMS1-201ENST00000342075 MAP1LC3B2A6NCE7 125 aa10.67□□□□□ -0.7
PMS1-201ENST00000342075 APOHP02749 345 aaPredicted RBP10.67□□□□□ -0.7
PMS1-201ENST00000342075 ELANEP08246 267 aa10.67□□□□□ -0.7
PMS1-201ENST00000342075 MAP1LC3BQ9GZQ8 125 aa10.67□□□□□ -0.7
PMS1-201ENST00000342075 TMEM231Q9H6L2 316 aa10.67□□□□□ -0.7
PMS1-201ENST00000342075 H3BTX0 84 aa10.67□□□□□ -0.7
PMS1-201ENST00000342075 OR10J4P0C629 311 aa10.67□□□□□ -0.7
PMS1-201ENST00000342075 FCGR2BP31994 310 aaPredicted RBP10.67□□□□□ -0.7
PMS1-201ENST00000342075 C10orf113Q5VZT2 155 aa10.67□□□□□ -0.7
PMS1-201ENST00000342075 PRIMA1Q86XR5 153 aa10.67□□□□□ -0.7
PMS1-201ENST00000342075 ZFAND3Q9H8U3 227 aa10.67□□□□□ -0.7
PMS1-201ENST00000342075 A0A0G2JLM5 398 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 BRI3O95415 125 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 ARL14EPLP0DKL9 152 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 PYYP10082 97 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 PROK1P58294 105 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 C8orf86Q6ZUL3 223 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 ZNF503Q96F45 646 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 DNAJC4Q9NNZ3 241 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 A0A1W2PPV4 95 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 YPEL3P61236 119 aaPredicted RBP10.66□□□□□ -0.7
PMS1-201ENST00000342075 RPL15P61313 204 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms