RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 CRXO43186 299 aaPredicted RBP12.33□□□□□ -0.44
PCDHB13-201ENST00000341948 SLC50A1Q9BRV3 221 aa12.33□□□□□ -0.44
PCDHB13-201ENST00000341948 LRRK1Q38SD2 2015 aa12.33□□□□□ -0.44
PCDHB13-201ENST00000341948 DUX3Q96PT4 197 aa12.33□□□□□ -0.44
PCDHB13-201ENST00000341948 IMMP2LQ96T52 175 aa12.33□□□□□ -0.44
PCDHB13-201ENST00000341948 CFPP27918 469 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 SAMD13Q5VXD3 122 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 HS3ST6Q96QI5 342 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 GATA3P23771 443 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 ZNF329Q86UD4 541 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 PRELID3AQ96N28 172 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 H0YJW9 148 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 IGLV1-44P01699 117 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 GRNP28799 593 aaKnown RBP12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 GNG5P63218 68 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 ZNF585BQ52M93 769 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 SLC25A34Q6PIV7 304 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 GGTLC1Q9BX51 225 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 VSIRQ9H7M9 311 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 CYTL1Q9NRR1 136 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 KLF17Q5JT82 389 aaPredicted RBP12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 LINC01587Q99440 93 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 EPDR1Q9UM22 224 aa12.32□□□□□ -0.44
PCDHB13-201ENST00000341948 EMP1P54849 157 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 C12orf54Q6X4T0 127 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 ANKHD1Q8IWZ3 2542 aaKnown RBP12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 TMEM238LA0A1B0GVL6 79 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 A6NJY4 79 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 GATA4P43694 442 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 LINC00518Q8N0U6 118 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 A0A1B0GW15 77 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 LTBP2Q14767 1821 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 TMEM14EPQ6UXP3 125 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 STHQ8IWL8 128 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 FER1L6-AS1Q8NA97 138 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 TMEM167AQ8TBQ9 72 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 PLXND1Q9Y4D7 1925 aa12.31□□□□□ -0.44
PCDHB13-201ENST00000341948 IZUMO1RA6ND01 250 aa12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 HIGD1CA8MV81 97 aa12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 RUSC1-AS1Q66K80 236 aa12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 RNASE7Q9H1E1 156 aaKnown RBP12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 MUC21A0A0G2JKD1 596 aa12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 MUC21A0A140T8X8 626 aa12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 LINC00473A8K010 186 aa12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 DDTP30046 118 aa12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 PAPPA-AS1Q5QFB9 102 aa12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 MUC21Q5SSG8 566 aa12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 GLMPQ8WWB7 406 aa12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 MBNL3Q9NUK0 354 aaKnown RBP12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 YLPM1P49750 1951 aaKnown RBP12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 HINT1P49773 126 aaPredicted RBP12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 LINC00205P59089 165 aa12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 ATRXP46100 2492 aa12.3□□□□□ -0.44
PCDHB13-201ENST00000341948 CIDEAO60543 219 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 PPP1R17O96001 155 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 Q8TCH9 128 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 TRAV3A0A0B4J244 114 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 H7C1H1 209 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 HTN3P15516 51 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 KCNS1Q96KK3 526 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 FABP5P3A8MUU1 101 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 E9PQ18 207 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 SAP30O75446 220 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 STAG3L2P0CL84 134 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 STAG3L3P0CL85 134 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 CR1LQ2VPA4 569 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 TEX38Q6PEX7 206 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 ATOH7Q8N100 152 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 OSTCQ9NRP0 149 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 C7orf71A4D174 169 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 REC114Q7Z4M0 266 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 SPRY4Q9C004 299 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 SIGLEC9Q9Y336 463 aa12.29□□□□□ -0.44
PCDHB13-201ENST00000341948 Q71RC1 249 aaPredicted RBP12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 ASCL2Q99929 193 aa12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 GCSHP23434 173 aa12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 RNASE4P34096 147 aaKnown RBP12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 UBE2E1P51965 193 aa12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 SELENOKQ9Y6D0 94 aa12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 SONP18583 2426 aaKnown RBP12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 APOHP02749 345 aaPredicted RBP12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 KIR3DL3Q8N743 410 aa12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 RAB37Q96AX2 223 aa12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 BEX4Q9NWD9 120 aaPredicted RBP12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 IGLV3-9A0A075B6K5 115 aa12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 TRAV1-1A0A0B4J248 108 aa12.28□□□□□ -0.44
PCDHB13-201ENST00000341948 IGF2RP11717 2491 aa12.27□□□□□ -0.44
PCDHB13-201ENST00000341948 CD5P06127 495 aa12.27□□□□□ -0.44
PCDHB13-201ENST00000341948 PAX1P15863 534 aa12.27□□□□□ -0.44
PCDHB13-201ENST00000341948 C3orf56Q8N813 242 aa12.27□□□□□ -0.44
PCDHB13-201ENST00000341948 OCC1Q8TAD7 63 aa12.27□□□□□ -0.44
PCDHB13-201ENST00000341948 ZNF414Q96IQ9 312 aa12.27□□□□□ -0.44
PCDHB13-201ENST00000341948 PSG8Q9UQ74 426 aa12.27□□□□□ -0.44
PCDHB13-201ENST00000341948 DENND4CQ5VZ89 1909 aa12.27□□□□□ -0.44
PCDHB13-201ENST00000341948 PIP4P2Q8N4L2 257 aa12.27□□□□□ -0.45
PCDHB13-201ENST00000341948 PGPEP1LA6NFU8 196 aa12.27□□□□□ -0.45
PCDHB13-201ENST00000341948 SOD3P08294 240 aa12.27□□□□□ -0.45
PCDHB13-201ENST00000341948 SRSF4Q08170 494 aaKnown RBP12.27□□□□□ -0.45
PCDHB13-201ENST00000341948 DMRT1Q9Y5R6 373 aa12.27□□□□□ -0.45
PCDHB13-201ENST00000341948 LGALS3P17931 250 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms