RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 VSIRQ9H7M9 311 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 MGAT4CQ9UBM8 478 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 IGKV1D-37A0A075B6S9 117 aa11.58□□□□□ -0.56
TNFRSF12A-202ENST00000341627 FNDC10F2Z333 226 aa11.58□□□□□ -0.56
TNFRSF12A-202ENST00000341627 RLN2P04090 185 aa11.58□□□□□ -0.56
TNFRSF12A-202ENST00000341627 HNRNPCP07910 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
TNFRSF12A-202ENST00000341627 CRYBB3P26998 211 aa11.58□□□□□ -0.56
TNFRSF12A-202ENST00000341627 ZNF90Q03938 601 aa11.58□□□□□ -0.56
TNFRSF12A-202ENST00000341627 TMEM144Q7Z5S9 345 aa11.58□□□□□ -0.56
TNFRSF12A-202ENST00000341627 ST8SIA2Q92186 375 aa11.58□□□□□ -0.56
TNFRSF12A-202ENST00000341627 PFDN2Q9UHV9 154 aa11.58□□□□□ -0.56
TNFRSF12A-202ENST00000341627 ALG5Q9Y673 324 aa11.58□□□□□ -0.56
TNFRSF12A-202ENST00000341627 OR4C46A6NHA9 309 aa11.57□□□□□ -0.56
TNFRSF12A-202ENST00000341627 CCNKO75909 580 aa11.57□□□□□ -0.56
TNFRSF12A-202ENST00000341627 CFDP00746 253 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF12A-202ENST00000341627 APOHP02749 345 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF12A-202ENST00000341627 RRAS2P62070 204 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF12A-202ENST00000341627 TCF24Q7RTU0 167 aa11.57□□□□□ -0.56
TNFRSF12A-202ENST00000341627 RNF125Q96EQ8 232 aa11.57□□□□□ -0.56
TNFRSF12A-202ENST00000341627 GGACTQ9BVM4 153 aa11.57□□□□□ -0.56
TNFRSF12A-202ENST00000341627 C11orf1Q9H5F2 150 aa11.57□□□□□ -0.56
TNFRSF12A-202ENST00000341627 LYRM2Q9NU23 88 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF12A-202ENST00000341627 RABAC1Q9UI14 185 aa11.57□□□□□ -0.56
TNFRSF12A-202ENST00000341627 IGKV1OR2-108A0A075B7D4 117 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 IGHV3-66A0A0C4DH42 116 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 FAM24AA6NFZ4 105 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 A8MZ25 164 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 DEDDO75618 318 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 CD7P09564 240 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 IGHV4-30-4P0DP06 118 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 NUP62P37198 522 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 EIF2B2P49770 351 aaKnown RBP11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 H2BFSP57053 126 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 PAFAH1B2P68402 229 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 OR2F1Q13607 317 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 USF2Q15853 346 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 STX12Q86Y82 276 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 PBDC1Q9BVG4 233 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 TUBA4BQ9H853 241 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 NPVFQ9HCQ7 196 aa11.56□□□□□ -0.56
TNFRSF12A-202ENST00000341627 P2RY1P47900 373 aa11.55□□□□□ -0.56
TNFRSF12A-202ENST00000341627 LYZP61626 148 aa11.55□□□□□ -0.56
TNFRSF12A-202ENST00000341627 RPL11P62913 178 aaKnown RBP11.55□□□□□ -0.56
TNFRSF12A-202ENST00000341627 LRRC37A5PQ49AS3 106 aa11.55□□□□□ -0.56
TNFRSF12A-202ENST00000341627 FAM90A2PQ658T7 463 aa11.55□□□□□ -0.56
TNFRSF12A-202ENST00000341627 TMEM252Q8N6L7 170 aa11.55□□□□□ -0.56
TNFRSF12A-202ENST00000341627 BPIFCQ8NFQ6 507 aa11.55□□□□□ -0.56
TNFRSF12A-202ENST00000341627 U3KQE9 123 aa11.55□□□□□ -0.56
TNFRSF12A-202ENST00000341627 HELTA6NFD8 242 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 OR11H12B2RN74 326 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 E5RGE8 158 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 DFFBO76075 338 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 CST7O76096 145 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 FRMD6-AS1P0C7T7 363 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 PET100P0DJ07 73 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 SULT1A1P50225 295 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 HBG1P69891 147 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 HBG2P69892 147 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 SLC38A11Q08AI6 406 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 ARL16Q0P5N6 197 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 TEPPQ6URK8 271 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 TMEM217Q8N7C4 229 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 PPP1R1CQ8WVI7 109 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 MED28Q9H204 178 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 C19orf73Q9NVV2 129 aa11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 HUWE1Q7Z6Z7 4374 aaKnown RBP11.54□□□□□ -0.56
TNFRSF12A-202ENST00000341627 IGKV3-7A0A075B6H7 116 aa11.53□□□□□ -0.56
TNFRSF12A-202ENST00000341627 DNASE2O00115 360 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF12A-202ENST00000341627 S100A7P31151 101 aa11.53□□□□□ -0.56
TNFRSF12A-202ENST00000341627 S100A11P31949 105 aa11.53□□□□□ -0.56
TNFRSF12A-202ENST00000341627 AP2S1P53680 142 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF12A-202ENST00000341627 CMC4P56277 68 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF12A-202ENST00000341627 SELENOTP62341 195 aa11.53□□□□□ -0.56
TNFRSF12A-202ENST00000341627 C16orf54Q6UWD8 224 aa11.53□□□□□ -0.56
TNFRSF12A-202ENST00000341627 CYP2G1PQ6ZSU1 146 aa11.53□□□□□ -0.56
TNFRSF12A-202ENST00000341627 LILRB2Q8N423 598 aa11.53□□□□□ -0.56
TNFRSF12A-202ENST00000341627 SLC25A31Q9H0C2 315 aa11.53□□□□□ -0.56
TNFRSF12A-202ENST00000341627 TRAV2A0A0B4J234 112 aa11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 IGSF23A1L1A6 192 aa11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 BUB3O43684 328 aa11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 NHLRC4P0CG21 123 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 TFPI2P48307 235 aa11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 OXA1LQ15070 435 aa11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 GBGT1Q8N5D6 347 aa11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 PPP1R14BQ96C90 147 aa11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 FAM110AQ9BQ89 295 aa11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 UQCC1Q9NVA1 299 aa11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 OR5AC2Q9NZP5 309 aa11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 TENM3Q9P273 2699 aa11.52□□□□□ -0.57
TNFRSF12A-202ENST00000341627 MPC2O95563 127 aa11.51□□□□□ -0.57
TNFRSF12A-202ENST00000341627 RAB31Q13636 194 aa11.51□□□□□ -0.57
TNFRSF12A-202ENST00000341627 ATP6V1FQ16864 119 aa11.51□□□□□ -0.57
TNFRSF12A-202ENST00000341627 ZNF546Q86UE3 836 aa11.51□□□□□ -0.57
TNFRSF12A-202ENST00000341627 STXBP6Q8NFX7 210 aa11.51□□□□□ -0.57
TNFRSF12A-202ENST00000341627 GLMPQ8WWB7 406 aa11.51□□□□□ -0.57
TNFRSF12A-202ENST00000341627 TMEM147Q9BVK8 224 aa11.51□□□□□ -0.57
TNFRSF12A-202ENST00000341627 MS4A6AQ9H2W1 248 aa11.51□□□□□ -0.57
TNFRSF12A-202ENST00000341627 SRD5A3Q9H8P0 318 aa11.51□□□□□ -0.57
TNFRSF12A-202ENST00000341627 SLC45A2Q9UMX9 530 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms