RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 FAM60AQ9NP50 221 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 TMED7-TICAM2A0A0A6YYA0 188 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 PRR19A6NJB7 356 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 SYNGR1O43759 233 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 DEFB103AP81534 67 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 H0YIZ8 118 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 MGPP08493 103 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 FAM90A1Q86YD7 464 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 DPH3Q96FX2 82 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 K7N7A8 449 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 IGHG1P01857 330 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 COX7A1P24310 79 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 OR1B1Q8NGR6 318 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 OR10D3Q8NH80 312 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 RNASE8Q8TDE3 154 aaKnown RBP2.97□□□□□ -1.93
SYNE1-201ENST00000341594 C22orf39Q6P5X5 142 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 ZNRD1Q9P1U0 126 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 A0A0U1RQV1 116 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 AMBPP02760 352 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 CBLN1P23435 193 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 NEGR1Q7Z3B1 354 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 KLF16Q9BXK1 252 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-201ENST00000341594 GPR35Q9HC97 309 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 LYRM9A8MSI8 78 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 CDKN1AP38936 164 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 PRSS27Q9BQR3 290 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 IGSF23A1L1A6 192 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 SH2D6Q7Z4S9 175 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 HOXD3P31249 432 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-201ENST00000341594 ABHD17AQ96GS6 310 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 TRAV26-1A0A087WT03 109 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 NDUFA7O95182 113 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 GYPEP15421 78 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 ATP1A1-AS1Q5TC04 95 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 POLR3KQ9Y2Y1 108 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-201ENST00000341594 GPX1P07203 203 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 TNFRSF4P43489 277 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 CATR1Q13166 79 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 BCL6BQ8N143 479 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-201ENST00000341594 TM4SF19Q96DZ7 209 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 SIRPDQ9H106 197 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 HOXA3O43365 443 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-201ENST00000341594 JMJD1CQ15652 2540 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 TMEM14DPA8MWL7 114 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 ABHD17BQ5VST6 288 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 TRANK1O15050 2925 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 DLX6P56179 175 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 PRR32B1ATL7 298 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 Q6Q795 121 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 Q6ZNB5 142 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 SLC25A48Q6ZT89 311 aaKnown RBP2.97□□□□□ -1.93
SYNE1-201ENST00000341594 ALKBH3Q96Q83 286 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-201ENST00000341594 ADAMTSL5Q6ZMM2 481 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 DYNLRB1Q9NP97 96 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 LINC01553A4QN01 128 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 LEPROTL1O95214 131 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 ZNF121P58317 390 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-201ENST00000341594 FNDC7Q5VTL7 733 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 PPDPFLQ8WWR9 84 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 CLDN23Q96B33 292 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 PXMP4Q9Y6I8 212 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 FGF21Q9NSA1 209 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 GLRXP35754 106 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 KLF5Q13887 457 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-201ENST00000341594 ZNF56Q15929 161 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 C1orf140Q5VVS0 124 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 H3BQ85 93 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 EPPINO95925 133 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 AMY1AP04745 511 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 ASAH2BP0C7U1 165 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 PLP2Q04941 152 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 LYPD1Q8N2G4 141 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 FAM27BQ5VT28 67 aa2.97□□□□□ -1.93
SYNE1-201ENST00000341594 PRDX2P32119 198 aa2.96□□□□□ -1.93
SYNE1-201ENST00000341594 A0A087WWL8 130 aa2.96□□□□□ -1.93
SYNE1-201ENST00000341594 UPK3AO75631 287 aa2.96□□□□□ -1.93
SYNE1-201ENST00000341594 DEFB126Q9BYW3 111 aa2.96□□□□□ -1.93
SYNE1-201ENST00000341594 IGLV3-21P80748 117 aaPredicted RBP2.96□□□□□ -1.94
SYNE1-201ENST00000341594 FAM214BQ7L5A3 538 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 INS-IGF2F8WCM5 200 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 SSR4P51571 173 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 ACTL10Q5JWF8 245 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 SP5Q6BEB4 398 aaPredicted RBP2.96□□□□□ -1.94
SYNE1-201ENST00000341594 DTX2Q86UW9 622 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 TMEM52Q8NDY8 209 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 C1QTNF4Q9BXJ3 329 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 FBXL15Q9H469 300 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 ZNF561-AS1K7EIQ3 104 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 SUMO2P61956 95 aaKnown RBP2.96□□□□□ -1.94
SYNE1-201ENST00000341594 CX3CL1P78423 397 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 ZNF837Q96EG3 531 aaPredicted RBP2.96□□□□□ -1.94
SYNE1-201ENST00000341594 ZNF708P17019 499 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 DEFB125Q8N687 156 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 OXGR1Q96P68 337 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 GGTLC1Q9BX51 225 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 NAV2Q8IVL1 2488 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 MST1LQ2TV78 715 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 RPRMQ9NS64 109 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 CISD3P0C7P0 127 aa2.96□□□□□ -1.94
SYNE1-201ENST00000341594 TEX38Q6PEX7 206 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms