RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 CRYBA4P53673 196 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 RPL15P61313 204 aaKnown RBP2.76□□□□□ -1.97
CSMD3-202ENST00000339701 MEIG1Q5JSS6 88 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 BVES-AS1Q5T3Y7 98 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 CFAP161Q6P656 301 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 C9orf47Q6ZRZ4 202 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 MISP3Q96FF7 219 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 PTPRSQ13332 1948 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 TRBV7-9A0A0J9YWB2 115 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 FFAR1O14842 300 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 CEACAM4O75871 244 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 TNFSF13O75888 250 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 GZMBP10144 247 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 RPUSD1Q9UJJ7 312 aaKnown RBP2.76□□□□□ -1.97
CSMD3-202ENST00000339701 A0A0U1RQS6 177 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 LIPT2A6NK58 231 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 VWC2LB2RUY7 222 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 RPS26P11Q5JNZ5 115 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-202ENST00000339701 ATG4DQ86TL0 474 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-202ENST00000339701 TMEM170AQ8WVE7 144 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 TMEM141Q96I45 108 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 MED20Q9H944 212 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 KLK11Q9UBX7 282 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 LINC00312Q9Y6C7 94 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 TRBV6-6A0A0A6YYG2 114 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 IGHV1-69DA0A0B4J2H0 117 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 MYMXA0A1B0GTQ4 84 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 IZUMO1RA6ND01 250 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 ATOX1O00244 68 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 PIN1P1O15428 100 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 RAMP3O60896 148 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 KLF17Q5JT82 389 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-202ENST00000339701 C8orf86Q6ZUL3 223 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 PRORYQ9H606 182 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 IGLV3-32A0A0A0MS00 114 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 SELLP14151 372 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 SSTR5P35346 364 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 Q6ZT83 130 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 YPEL2Q96QA6 119 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 FOXI3A8MTJ6 420 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-202ENST00000339701 CTSBP07858 339 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 FGF8P55075 233 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-202ENST00000339701 RBMY1FQ15415 496 aaKnown RBP2.76□□□□□ -1.97
CSMD3-202ENST00000339701 CR1LQ2VPA4 569 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 C4orf48Q5BLP8 95 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 GAPTQ8N292 157 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 PGLYRP4Q96LB8 373 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 NEU1Q99519 415 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 SPSB2Q99619 263 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 C20orf144Q9BQM9 153 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 ERG28Q9UKR5 140 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 K7ERS5 55 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 RRHO14718 337 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 SPRY1O43609 319 aaPredicted RBP2.75□□□□□ -1.97
CSMD3-202ENST00000339701 CXCL5P42830 114 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 DYNLT3P51808 116 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 RUNX1Q01196 453 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 SLC7A5P1Q8MH63 180 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF501Q96CX3 271 aaPredicted RBP2.75□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF48Q96MX3 618 aaPredicted RBP2.75□□□□□ -1.97
CSMD3-202ENST00000339701 TLNRD1Q9H1K6 362 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 HCFC1P51610 2035 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 A0A0G2JK05 382 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 MSMBP08118 114 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 NBEAP1P0C6P0 100 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 TIAL1Q01085 375 aaKnown RBP eCLIP2.75□□□□□ -1.97
CSMD3-202ENST00000339701 UNC119Q13432 240 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 LY6G6FQ5SQ64 297 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 CLUHP3Q96NS8 147 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 CLEC7AQ9BXN2 247 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 WNT5BQ9H1J7 359 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 OTORQ9NRC9 128 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 TSSC4Q9Y5U2 329 aaPredicted RBP2.75□□□□□ -1.97
CSMD3-202ENST00000339701 NPIPB11E5RHQ5 1161 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 WDR38Q5JTN6 314 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 STPG4Q8N801 248 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 APCDD1LQ8NCL9 501 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 VWCEQ96DN2 955 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 CLEC2DQ9UHP7 191 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 A0A1B0GV90 55 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 VCYO14598 125 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 LEPROTO15243 131 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 GREM1O60565 184 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 MOSP00540 346 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 KLHL30-AS1Q8NEE0 82 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 OR11H4Q8NGC9 324 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 PPDPFLQ8WWR9 84 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 PRSS27Q9BQR3 290 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 SEMA5BQ9P283 1151 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 JMJD1CQ15652 2540 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 TRAV13-2A0A0B4J235 113 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 TRAV40A0A0B4J280 105 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 FRS3O43559 492 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 KIR2DL5BQ8NHK3 375 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 EMC6Q9BV81 110 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.75□□□□□ -1.97
CSMD3-202ENST00000339701 H3BVH4 76 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 SOCS3O14543 225 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 TNFRSF1BP20333 461 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 EVI2AP22794 236 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms