RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 FAM90A1Q86YD7 464 aa10.19□□□□□ -0.78
RIOK3-201ENST00000339486 ZCCHC24Q8N2G6 241 aaKnown RBP10.19□□□□□ -0.78
RIOK3-201ENST00000339486 FAM168AQ92567 244 aa10.19□□□□□ -0.78
RIOK3-201ENST00000339486 MEGF9Q9H1U4 602 aa10.19□□□□□ -0.78
RIOK3-201ENST00000339486 ZNF134P52741 427 aa10.19□□□□□ -0.78
RIOK3-201ENST00000339486 RASL11AQ6T310 242 aa10.19□□□□□ -0.78
RIOK3-201ENST00000339486 ZNF414Q96IQ9 312 aa10.19□□□□□ -0.78
RIOK3-201ENST00000339486 TTC28Q96AY4 2481 aa10.19□□□□□ -0.78
RIOK3-201ENST00000339486 TRAV8-1A0A0A6YYK1 113 aa10.19□□□□□ -0.78
RIOK3-201ENST00000339486 HIST1H1AQ02539 215 aaPredicted RBP10.19□□□□□ -0.78
RIOK3-201ENST00000339486 TRIP6Q15654 476 aaKnown RBP10.19□□□□□ -0.78
RIOK3-201ENST00000339486 Q6ZR03 302 aa10.19□□□□□ -0.78
RIOK3-201ENST00000339486 FMC1Q96HJ9 113 aa10.19□□□□□ -0.78
RIOK3-201ENST00000339486 TMUB1Q9BVT8 246 aa10.19□□□□□ -0.78
RIOK3-201ENST00000339486 OR2T8A6NH00 312 aa10.18□□□□□ -0.78
RIOK3-201ENST00000339486 C1orf162Q8NEQ5 155 aaPredicted RBP10.18□□□□□ -0.78
RIOK3-201ENST00000339486 TMEM186Q96B77 213 aa10.18□□□□□ -0.78
RIOK3-201ENST00000339486 CHCHD1Q96BP2 118 aaKnown RBP10.18□□□□□ -0.78
RIOK3-201ENST00000339486 C5orf30Q96GV9 206 aa10.18□□□□□ -0.78
RIOK3-201ENST00000339486 CLEC3BP05452 202 aa10.18□□□□□ -0.78
RIOK3-201ENST00000339486 RNASE2P10153 161 aaKnown RBP10.18□□□□□ -0.78
RIOK3-201ENST00000339486 PRB3Q04118 309 aaPredicted RBP10.18□□□□□ -0.78
RIOK3-201ENST00000339486 RNFT1Q5M7Z0 435 aa10.18□□□□□ -0.78
RIOK3-201ENST00000339486 RNASE8Q8TDE3 154 aaKnown RBP10.18□□□□□ -0.78
RIOK3-201ENST00000339486 PRELID3AQ96N28 172 aa10.18□□□□□ -0.78
RIOK3-201ENST00000339486 TMEM14BQ9NUH8 114 aa10.18□□□□□ -0.78
RIOK3-201ENST00000339486 RPUSD1Q9UJJ7 312 aaKnown RBP10.18□□□□□ -0.78
RIOK3-201ENST00000339486 KIR2DL2P43627 348 aaPredicted RBP10.17□□□□□ -0.78
RIOK3-201ENST00000339486 RPL11P62913 178 aaKnown RBP10.17□□□□□ -0.78
RIOK3-201ENST00000339486 CIARTQ8N365 385 aaPredicted RBP10.17□□□□□ -0.78
RIOK3-201ENST00000339486 NEUROG1Q92886 237 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 S4R3C0 116 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 C15orf65H3BRN8 121 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 DEFB124Q8NES8 71 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 LGALS7P47929 136 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 PRR20EP86478 221 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 PRR20CP86479 221 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 PRR20DP86480 221 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 PRR20BP86481 221 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 PRR20AP86496 221 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 SPCS1Q9Y6A9 102 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 TM4SF5O14894 197 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 IL4P05112 153 aa10.17□□□□□ -0.78
RIOK3-201ENST00000339486 MBNL2Q5VZF2 373 aaKnown RBP10.17□□□□□ -0.78
RIOK3-201ENST00000339486 LSM4Q9Y4Z0 139 aaKnown RBP10.17□□□□□ -0.78
RIOK3-201ENST00000339486 MALRD1Q5VYJ5 2156 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 GAGE12BA1L429 117 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 MMP23AO75900 390 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 S100A4P26447 101 aaKnown RBP10.16□□□□□ -0.78
RIOK3-201ENST00000339486 FAM27E3Q08E93 113 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 TMEM30BQ3MIR4 351 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 IGHV2-26A0A0B4J1V2 119 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 SMIM27A0A1W2PRY6 76 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 F2RL2O00254 374 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 DAZAP2Q15038 168 aaPredicted RBP10.16□□□□□ -0.78
RIOK3-201ENST00000339486 TIMM23BQ5SRD1 257 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 CST9LQ9H4G1 147 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 CEACAM8P31997 349 aaPredicted RBP10.16□□□□□ -0.78
RIOK3-201ENST00000339486 CACNG7P62955 275 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 ZNF329Q86UD4 541 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 LINC00312Q9Y6C7 94 aa10.16□□□□□ -0.78
RIOK3-201ENST00000339486 C16orf97H3BN30 126 aa10.15□□□□□ -0.78
RIOK3-201ENST00000339486 EXOC3-AS1Q8N2X6 119 aa10.15□□□□□ -0.78
RIOK3-201ENST00000339486 FBXL15Q9H469 300 aa10.15□□□□□ -0.78
RIOK3-201ENST00000339486 IGHV3-35A0A0C4DH35 117 aa10.15□□□□□ -0.78
RIOK3-201ENST00000339486 ITGB1BP1O14713 200 aa10.15□□□□□ -0.78
RIOK3-201ENST00000339486 FXYD7P58549 80 aa10.15□□□□□ -0.78
RIOK3-201ENST00000339486 EBLN2Q6P2I7 272 aa10.15□□□□□ -0.78
RIOK3-201ENST00000339486 OR2K2Q8NGT1 345 aa10.15□□□□□ -0.78
RIOK3-201ENST00000339486 TMPRSS3P57727 454 aa10.15□□□□□ -0.79
RIOK3-201ENST00000339486 KIR3DL3Q8N743 410 aa10.15□□□□□ -0.79
RIOK3-201ENST00000339486 PCNX2A6NKB5 2137 aa10.15□□□□□ -0.79
RIOK3-201ENST00000339486 PRRC2CQ9Y520 2896 aaKnown RBP10.14□□□□□ -0.79
RIOK3-201ENST00000339486 TCRAP04437 139 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 OCIAD2Q56VL3 154 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 MS4A6AQ9H2W1 248 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 SPAARA0A1B0GVQ0 90 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 FNDC10F2Z333 226 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 IGKV3-15P01624 115 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 C11orf53Q8IXP5 236 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 TEX45Q8NA69 505 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 MYOZ3Q8TDC0 251 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 TIMD4Q96H15 378 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 ASCL2Q99929 193 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 J3KRW8 73 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 SMIM13P0DJ93 91 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 BRWD1-AS2P59051 145 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 DEFB123Q8N688 67 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 MDS2Q8NDY4 140 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 MAP1LC3AQ9H492 121 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 TP53TG3Q9ULZ0 132 aa10.14□□□□□ -0.79
RIOK3-201ENST00000339486 GUSBP1Q15486 140 aa10.13□□□□□ -0.79
RIOK3-201ENST00000339486 DUX4L9Q6RFH8 374 aaPredicted RBP10.13□□□□□ -0.79
RIOK3-201ENST00000339486 GFRALQ6UXV0 394 aa10.13□□□□□ -0.79
RIOK3-201ENST00000339486 ASCL5Q7RTU5 278 aa10.13□□□□□ -0.79
RIOK3-201ENST00000339486 ORMDL3Q8N138 153 aa10.13□□□□□ -0.79
RIOK3-201ENST00000339486 PLXNB1O43157 2135 aa10.13□□□□□ -0.79
RIOK3-201ENST00000339486 SEC11AP67812 179 aa10.13□□□□□ -0.79
RIOK3-201ENST00000339486 RBPJQ06330 500 aa10.13□□□□□ -0.79
RIOK3-201ENST00000339486 SCGB1D4Q6XE38 83 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms