RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SERF1AO75920 110 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 FSTL3O95633 263 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 IGLV1-47P01700 117 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 RAB4BP61018 213 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 RANP62826 216 aaKnown RBP13.03□□□□□ -0.32
LITAF-201ENST00000339430 GNG5P63218 68 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 KIAA1644Q3SXP7 199 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 ZNF841Q6ZN19 808 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 FAM168AQ92567 244 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 FXYD5Q96DB9 178 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 SGK494Q96LW2 274 aa13.03□□□□□ -0.32
LITAF-201ENST00000339430 SSBP3Q9BWW4 388 aaPredicted RBP13.03□□□□□ -0.32
LITAF-201ENST00000339430 BUB1B-PAK6H3BSN5 160 aa13.02□□□□□ -0.32
LITAF-201ENST00000339430 ISLRO14498 428 aa13.02□□□□□ -0.32
LITAF-201ENST00000339430 PRRX1P54821 245 aa13.02□□□□□ -0.32
LITAF-201ENST00000339430 CX3CL1P78423 397 aa13.02□□□□□ -0.32
LITAF-201ENST00000339430 IQCJQ1A5X6 159 aa13.02□□□□□ -0.32
LITAF-201ENST00000339430 REC114Q7Z4M0 266 aa13.02□□□□□ -0.32
LITAF-201ENST00000339430 TEX45Q8NA69 505 aa13.02□□□□□ -0.32
LITAF-201ENST00000339430 NAT8BQ9UHF3 227 aa13.02□□□□□ -0.32
LITAF-201ENST00000339430 SIGLEC9Q9Y336 463 aa13.02□□□□□ -0.32
LITAF-201ENST00000339430 PPIAL4CA0A0B4J2A2 164 aa13.02□□□□□ -0.33
LITAF-201ENST00000339430 PPIAL4GP0DN37 164 aa13.02□□□□□ -0.33
LITAF-201ENST00000339430 BAGE3Q86Y29 109 aa13.02□□□□□ -0.33
LITAF-201ENST00000339430 BAGE2Q86Y30 109 aa13.02□□□□□ -0.33
LITAF-201ENST00000339430 LURAP1LQ8IV03 231 aa13.02□□□□□ -0.33
LITAF-201ENST00000339430 CLEC7AQ9BXN2 247 aa13.02□□□□□ -0.33
LITAF-201ENST00000339430 FBXL15Q9H469 300 aa13.02□□□□□ -0.33
LITAF-201ENST00000339430 RPH3ALQ9UNE2 315 aa13.02□□□□□ -0.33
LITAF-201ENST00000339430 A8MWP6 167 aa13.01□□□□□ -0.33
LITAF-201ENST00000339430 PEX7O00628 323 aa13.01□□□□□ -0.33
LITAF-201ENST00000339430 IGFBPL1Q8WX77 278 aa13.01□□□□□ -0.33
LITAF-201ENST00000339430 CDC42EP3Q9UKI2 254 aa13.01□□□□□ -0.33
LITAF-201ENST00000339430 H3BTX0 84 aa13.01□□□□□ -0.33
LITAF-201ENST00000339430 CRYGBP07316 175 aa13.01□□□□□ -0.33
LITAF-201ENST00000339430 LEMD1Q68G75 181 aa13.01□□□□□ -0.33
LITAF-201ENST00000339430 PRR27Q6MZM9 219 aa13.01□□□□□ -0.33
LITAF-201ENST00000339430 NEU4Q8WWR8 484 aaPredicted RBP13.01□□□□□ -0.33
LITAF-201ENST00000339430 GNB1LQ9BYB4 327 aa13.01□□□□□ -0.33
LITAF-201ENST00000339430 COMPP49747 757 aaPredicted RBP13□□□□□ -0.33
LITAF-201ENST00000339430 ETFRF1Q6IPR1 90 aa13□□□□□ -0.33
LITAF-201ENST00000339430 PPP1R27Q86WC6 154 aa13□□□□□ -0.33
LITAF-201ENST00000339430 RPEQ96AT9 228 aa13□□□□□ -0.33
LITAF-201ENST00000339430 ONECUT1Q9UBC0 465 aa13□□□□□ -0.33
LITAF-201ENST00000339430 CRYBG3Q68DQ2 2970 aa13□□□□□ -0.33
LITAF-201ENST00000339430 NDUFS7O75251 213 aa13□□□□□ -0.33
LITAF-201ENST00000339430 GOSR1O95249 250 aa13□□□□□ -0.33
LITAF-201ENST00000339430 CRYGCP07315 174 aa13□□□□□ -0.33
LITAF-201ENST00000339430 PLA2G2AP14555 144 aa13□□□□□ -0.33
LITAF-201ENST00000339430 PAX1P15863 534 aa13□□□□□ -0.33
LITAF-201ENST00000339430 TAS2R60P59551 318 aa13□□□□□ -0.33
LITAF-201ENST00000339430 TMEM136Q6ZRR5 245 aa13□□□□□ -0.33
LITAF-201ENST00000339430 TNFRSF14Q92956 283 aa13□□□□□ -0.33
LITAF-201ENST00000339430 TENM4Q6N022 2769 aa12.99□□□□□ -0.33
LITAF-201ENST00000339430 C22orf15Q8WYQ4 148 aa12.99□□□□□ -0.33
LITAF-201ENST00000339430 PERPQ96FX8 193 aa12.99□□□□□ -0.33
LITAF-201ENST00000339430 NAGKQ9UJ70 344 aa12.99□□□□□ -0.33
LITAF-201ENST00000339430 TRBV9A0A0B4J1U6 114 aa12.99□□□□□ -0.33
LITAF-201ENST00000339430 SMIM27A0A1W2PRY6 76 aa12.99□□□□□ -0.33
LITAF-201ENST00000339430 ZNF705FA8MVS1 300 aaPredicted RBP12.99□□□□□ -0.33
LITAF-201ENST00000339430 SLC25A5P05141 298 aaKnown RBP12.99□□□□□ -0.33
LITAF-201ENST00000339430 ZNF705DP0CH99 300 aaPredicted RBP12.99□□□□□ -0.33
LITAF-201ENST00000339430 ZNF705BP0CI00 300 aaPredicted RBP12.99□□□□□ -0.33
LITAF-201ENST00000339430 TPPP2P59282 170 aa12.99□□□□□ -0.33
LITAF-201ENST00000339430 PLGLAQ15195 96 aa12.99□□□□□ -0.33
LITAF-201ENST00000339430 Q6ZWC4 215 aa12.99□□□□□ -0.33
LITAF-201ENST00000339430 NOL4LQ96MY1 436 aaPredicted RBP12.99□□□□□ -0.33
LITAF-201ENST00000339430 GNB4Q9HAV0 340 aa12.99□□□□□ -0.33
LITAF-201ENST00000339430 SVEP1Q4LDE5 3571 aa12.98□□□□□ -0.33
LITAF-201ENST00000339430 TEX22C9J3V5 150 aa12.98□□□□□ -0.33
LITAF-201ENST00000339430 COX6B1P14854 86 aa12.98□□□□□ -0.33
LITAF-201ENST00000339430 ZMAT5Q9UDW3 170 aaKnown RBP12.98□□□□□ -0.33
LITAF-201ENST00000339430 POLR3KQ9Y2Y1 108 aaPredicted RBP12.98□□□□□ -0.33
LITAF-201ENST00000339430 USP9YO00507 2555 aaPredicted RBP12.98□□□□□ -0.33
LITAF-201ENST00000339430 PGPA6NDG6 321 aa12.98□□□□□ -0.33
LITAF-201ENST00000339430 LDLRAD2Q5SZI1 272 aa12.98□□□□□ -0.33
LITAF-201ENST00000339430 TRGV9Q99603 122 aa12.98□□□□□ -0.33
LITAF-201ENST00000339430 HSPB9Q9BQS6 159 aa12.98□□□□□ -0.33
LITAF-201ENST00000339430 J3QKU1 62 aa12.97□□□□□ -0.33
LITAF-201ENST00000339430 AMY1AP04745 511 aa12.97□□□□□ -0.33
LITAF-201ENST00000339430 RPL19P84098 196 aaKnown RBP12.97□□□□□ -0.33
LITAF-201ENST00000339430 WDR73Q6P4I2 378 aa12.97□□□□□ -0.33
LITAF-201ENST00000339430 TMEM116Q8NCL8 245 aa12.97□□□□□ -0.33
LITAF-201ENST00000339430 BEND2Q8NDZ0 799 aa12.97□□□□□ -0.33
LITAF-201ENST00000339430 SAMD10Q9BYL1 202 aa12.97□□□□□ -0.33
LITAF-201ENST00000339430 F11RQ9Y624 299 aaKnown RBP12.97□□□□□ -0.33
LITAF-201ENST00000339430 CORTO00230 105 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 HYPMO75409 117 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 UBE2G1P62253 170 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 PVRIGQ6DKI7 326 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 NUDT10Q8NFP7 164 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 SRSF12Q8WXF0 261 aaKnown RBP12.96□□□□□ -0.33
LITAF-201ENST00000339430 NUDT11Q96G61 164 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 TBX15Q96SF7 602 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 FAM103A1Q9BTL3 118 aaKnown RBP12.96□□□□□ -0.33
LITAF-201ENST00000339430 EPDR1Q9UM22 224 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 CENPEQ02224 2701 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 A0A1B0GV90 55 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 NBEAP1P0C6P0 100 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 CD24P25063 80 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms