RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 RAB9AP51151 201 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 RHOBP62745 196 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 CLEC19AQ6UXS0 136 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 CCDC140Q96MF4 163 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 DNAJC4Q9NNZ3 241 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 PRELID1Q9Y255 219 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 HIVEP1P15822 2718 aa11.46□□□□□ -0.58
CDK5RAP3-201ENST00000338399 NUDT19A8MXV4 375 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 COX7A2P2O60397 106 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 TOMM40O96008 361 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 FABP1P07148 127 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 OR5G3P0C626 314 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 HILS1P60008 231 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 PATE2Q6UY27 113 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 Q6ZSV7 163 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 MIR17HGQ75NE6 70 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 OR1L4Q8NGR5 311 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 OR1B1Q8NGR6 318 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 GATAD1Q8WUU5 269 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 CHRDL1Q9BU40 450 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 SERTAD4Q9NUC0 356 aa11.45□□□□□ -0.58
CDK5RAP3-201ENST00000338399 RAB19A4D1S5 217 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 RNASE1P07998 156 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 PSMB8P28062 276 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 ADMP35318 185 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 YPEL3P61236 119 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 LYZP61626 148 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 C10orf113Q5VZT2 155 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 USMG5Q96IX5 58 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 PFDN5Q99471 154 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 C19orf24Q9BVV8 132 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 FUT9Q9Y231 359 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 I3L521 148 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 NUPL2O15504 423 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 SCGB2A1O75556 95 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 IGHV3-11P01762 117 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 PLP1P60201 277 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 SLC35B1P78383 322 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 SRSF3P84103 164 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 COMMD1Q8N668 190 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 OR51G1Q8NGK1 321 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 UHRF2Q96PU4 802 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 PBDC1Q9BVG4 233 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 TMPRSS5Q9H3S3 457 aa11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 GAR1Q9NY12 217 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-201ENST00000338399 HYPMO75409 117 aa11.43□□□□□ -0.58
CDK5RAP3-201ENST00000338399 CRYBA1P05813 215 aa11.43□□□□□ -0.58
CDK5RAP3-201ENST00000338399 STAG3L2P0CL84 134 aa11.43□□□□□ -0.58
CDK5RAP3-201ENST00000338399 STAG3L3P0CL85 134 aa11.43□□□□□ -0.58
CDK5RAP3-201ENST00000338399 IQCF2Q8IXL9 164 aa11.43□□□□□ -0.58
CDK5RAP3-201ENST00000338399 EIF4E3Q8N5X7 224 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-201ENST00000338399 ZNF491Q8N8L2 437 aa11.43□□□□□ -0.58
CDK5RAP3-201ENST00000338399 Q8WTZ3 238 aa11.43□□□□□ -0.58
CDK5RAP3-201ENST00000338399 TMEM231Q9H6L2 316 aa11.43□□□□□ -0.58
CDK5RAP3-201ENST00000338399 GNB4Q9HAV0 340 aa11.43□□□□□ -0.58
CDK5RAP3-201ENST00000338399 ELOA3CA0A087WX78 387 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 IGHV3-35A0A0C4DH35 117 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 A0A0G2JLM5 398 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 TMEM89A2RUT3 159 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 TGOLN2O43493 480 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 SCO1O75880 301 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 IL4P05112 153 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 GUK1Q16774 197 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 MORN5Q5VZ52 161 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 TEX38Q6PEX7 206 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 LINC00305Q7Z4B0 112 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 RNF2Q99496 336 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 MRPL32Q9BYC8 188 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 TRAV5A0A0B4J249 113 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 PPP5D1E7EU14 171 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 ARL14EPLP0DKL9 152 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 HAGHQ16775 308 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 RNF125Q96EQ8 232 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 SCRT1Q9BWW7 348 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 EIF5A2Q9GZV4 153 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 GNG13Q9P2W3 67 aa11.42□□□□□ -0.58
CDK5RAP3-201ENST00000338399 WI2-2373I1.2A0A1W2PRP0 233 aa11.41□□□□□ -0.58
CDK5RAP3-201ENST00000338399 CXorf1O96002 111 aa11.41□□□□□ -0.58
CDK5RAP3-201ENST00000338399 RPLP1P05386 114 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-201ENST00000338399 JMJD8Q96S16 334 aa11.41□□□□□ -0.58
CDK5RAP3-201ENST00000338399 ATP6V0BQ99437 205 aa11.41□□□□□ -0.58
CDK5RAP3-201ENST00000338399 RARRES2Q99969 163 aa11.41□□□□□ -0.58
CDK5RAP3-201ENST00000338399 TECRQ9NZ01 308 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-201ENST00000338399 HIGD1AQ9Y241 93 aa11.41□□□□□ -0.58
CDK5RAP3-201ENST00000338399 PUS1Q9Y606 427 aaKnown RBP eCLIP11.41□□□□□ -0.58
CDK5RAP3-201ENST00000338399 RBFOX3A6NFN3 312 aa11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 OR2C1O95371 312 aa11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 TRBV12-3P01733 135 aa11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 ELANEP08246 267 aa11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 C8orf88P0DMB2 117 aa11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 RPL15P61313 204 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 FOXE3Q13461 319 aa11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 KIAA0141Q14154 515 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 UQCC3Q6UW78 93 aa11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 ZNF600Q6ZNG1 722 aa11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 OR4X2Q8NGF9 303 aa11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 ZNF414Q96IQ9 312 aa11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 TREM1Q9NP99 234 aa11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 MRPL27Q9P0M9 148 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-201ENST00000338399 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms