RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 TPTE2P1Q5T6R2 138 aa10.04□□□□□ -0.8
LIMK1-201ENST00000336180 VSTM2AQ8TAG5 236 aa10.04□□□□□ -0.8
LIMK1-201ENST00000336180 SRSF12Q8WXF0 261 aaKnown RBP10.04□□□□□ -0.8
LIMK1-201ENST00000336180 SEC14L6B5MCN3 397 aa10.04□□□□□ -0.8
LIMK1-201ENST00000336180 RPL29P47914 159 aaKnown RBP10.04□□□□□ -0.8
LIMK1-201ENST00000336180 NAT8Q9UHE5 227 aa10.04□□□□□ -0.8
LIMK1-201ENST00000336180 C20orf202A1L168 122 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 SLC17A3O00476 420 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 CCL25O15444 150 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 MPDU1O75352 247 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 CXorf1O96002 111 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 MT-CO2P00403 227 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 TMEM30BQ3MIR4 351 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 MAPK1IP1LQ8NDC0 245 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 MANBALQ9NQG1 85 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 ABCA2Q9BZC7 2435 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 IGKV1D-37A0A075B6S9 117 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 TRAV34A0A0B4J273 112 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 RBP4P02753 201 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 PPBPP02775 128 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 CYP2G1PQ6ZSU1 146 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 C1QL4Q86Z23 238 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 STXBP6Q8NFX7 210 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 OR5AU1Q8NGC0 362 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 SMDT1Q9H4I9 107 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 DPM3Q9P2X0 92 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 COX7A2P2O60397 106 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 COL8A1P27658 744 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 PATE2Q6UY27 113 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 ALKBH7Q9BT30 221 aaPredicted RBP10.03□□□□□ -0.8
LIMK1-201ENST00000336180 ZNF355PQ9NSJ1 428 aa10.03□□□□□ -0.8
LIMK1-201ENST00000336180 H7BYZ3 331 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 SLC35B1P78383 322 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 BRD3OSQ6XYD6 125 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 BCL6BQ8N143 479 aaPredicted RBP10.02□□□□□ -0.81
LIMK1-201ENST00000336180 PERPQ96FX8 193 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 LINC00527Q9UJ94 153 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 FUT9Q9Y231 359 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 COMPP49747 757 aaPredicted RBP10.02□□□□□ -0.81
LIMK1-201ENST00000336180 ZNF137PP52743 207 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 GNG5P63218 68 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 MMD2Q8IY49 270 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 NEU4Q8WWR8 484 aaPredicted RBP10.02□□□□□ -0.81
LIMK1-201ENST00000336180 EAF1Q96JC9 268 aaPredicted RBP10.02□□□□□ -0.81
LIMK1-201ENST00000336180 YPEL4Q96NS1 127 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 WNT10AQ9GZT5 417 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 TNFRSF19Q9NS68 423 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 CUBNO60494 3623 aa10.02□□□□□ -0.81
LIMK1-201ENST00000336180 CLDN34H7C241 214 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 IGHV4-39P01824 125 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 FRMD6-AS1P0C7T7 363 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 LGALS7P47929 136 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 UBE2L3P68036 154 aaKnown RBP10.01□□□□□ -0.81
LIMK1-201ENST00000336180 PRSS57Q6UWY2 283 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 LY6G5BQ8NDX9 201 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 OCC1Q8TAD7 63 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 TEX22C9J3V5 150 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 GALR1P47211 349 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 LYZP61626 148 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 RANP62826 216 aaKnown RBP10.01□□□□□ -0.81
LIMK1-201ENST00000336180 NDPQ00604 133 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 FXYD3Q14802 87 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 DTX2Q86UW9 622 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 TMEM219Q86XT9 240 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 GGTLC3B5MD39 225 aa10.01□□□□□ -0.81
LIMK1-201ENST00000336180 CCDC168Q8NDH2 2452 aa10□□□□□ -0.81
LIMK1-201ENST00000336180 LY6LH3BQJ8 138 aa10□□□□□ -0.81
LIMK1-201ENST00000336180 LINC00305Q7Z4B0 112 aa10□□□□□ -0.81
LIMK1-201ENST00000336180 LINC01551Q86U37 167 aa10□□□□□ -0.81
LIMK1-201ENST00000336180 FRZBQ92765 325 aa10□□□□□ -0.81
LIMK1-201ENST00000336180 DOPEY2Q9Y3R5 2298 aa10□□□□□ -0.81
LIMK1-201ENST00000336180 PPP1R2P9O14990 202 aa10□□□□□ -0.81
LIMK1-201ENST00000336180 HOXB4P17483 251 aaPredicted RBP10□□□□□ -0.81
LIMK1-201ENST00000336180 TCL1AP56279 114 aa10□□□□□ -0.81
LIMK1-201ENST00000336180 SCGB2A2Q13296 93 aa10□□□□□ -0.81
LIMK1-201ENST00000336180 TIGITQ495A1 244 aa10□□□□□ -0.81
LIMK1-201ENST00000336180 Q71RC1 249 aaPredicted RBP10□□□□□ -0.81
LIMK1-201ENST00000336180 MGST1P10620 155 aaKnown RBP9.99□□□□□ -0.81
LIMK1-201ENST00000336180 SUB1P53999 127 aaKnown RBP eCLIP9.99□□□□□ -0.81
LIMK1-201ENST00000336180 C10orf113Q5VZT2 155 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 SLC25A2Q9BXI2 301 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 ANKRD17O75179 2603 aaKnown RBP9.99□□□□□ -0.81
LIMK1-201ENST00000336180 LINC01548A6NM66 108 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 F6UZH7 168 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 TMEM250H0YL14 139 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 K7EP13 123 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 CA1P00915 261 aaPredicted RBP9.99□□□□□ -0.81
LIMK1-201ENST00000336180 CRYGBP07316 175 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 PRTN3P24158 256 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 EFNA4P52798 201 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 PQLC2Q6ZP29 291 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 TEX45Q8NA69 505 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 OR5R1Q8NH85 324 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 CFHR4Q92496 578 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 SELENOKQ9Y6D0 94 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 K7EN84 100 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 NBEAP1P0C6P0 100 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 RPL19P84098 196 aaKnown RBP9.99□□□□□ -0.81
LIMK1-201ENST00000336180 ZNF705AQ6ZN79 300 aaPredicted RBP9.99□□□□□ -0.81
LIMK1-201ENST00000336180 RNASE7Q9H1E1 156 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms