RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 IGLV3-1P01715 115 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 TMEM167AQ8TBQ9 72 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 ASCL2Q99929 193 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 YAE1D1Q9NRH1 226 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 UQCR10Q9UDW1 63 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 ZNF324O75467 553 aaPredicted RBP10.61□□□□□ -0.71
VSTM4-202ENST00000332853 TSPOP30536 169 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 C15orf32Q32M92 178 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 DNLZQ5SXM8 178 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 PSG8Q9UQ74 426 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 UTRNP46939 3433 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 SNAI2O43623 268 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 GFI1BQ5VTD9 330 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 IGFL3Q6UXB1 125 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 RAB37Q96AX2 223 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 BPESC1Q9GZL8 116 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 IGKV2-40A0A087WW87 121 aaPredicted RBP10.6□□□□□ -0.71
VSTM4-202ENST00000332853 IGKV2D-40P01614 121 aaPredicted RBP10.6□□□□□ -0.71
VSTM4-202ENST00000332853 AREGP15514 252 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 ASIPP42127 132 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 COL5A1-AS1Q5SY13 56 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 C14orf144Q96I85 54 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 TCF21O43680 179 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 RPL24P83731 157 aaKnown RBP10.6□□□□□ -0.71
VSTM4-202ENST00000332853 TMEM170AQ8WVE7 144 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 SIGLEC9Q9Y336 463 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 UBE2L6O14933 153 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 PF4P02776 101 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 TEX29Q8N6K0 151 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 SLC25A39Q9BZJ4 359 aaPredicted RBP10.6□□□□□ -0.71
VSTM4-202ENST00000332853 CEACAM4O75871 244 aa10.6□□□□□ -0.71
VSTM4-202ENST00000332853 C9JQL5 133 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 H3BVH4 76 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 H7C2G1 150 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 VDAC2P45880 294 aaPredicted RBP10.59□□□□□ -0.71
VSTM4-202ENST00000332853 MST1LQ2TV78 715 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 ZNF600Q6ZNG1 722 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 CIARTQ8N365 385 aaPredicted RBP10.59□□□□□ -0.71
VSTM4-202ENST00000332853 TMEM160Q9NX00 188 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 IGKV1-39P01597 117 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 IGKV1D-39P04432 117 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 LMO1P25800 156 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 IGFL4Q6B9Z1 124 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 FBLN7Q53RD9 439 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 ARL6IP6Q8N6S5 226 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 GSN-AS1Q9NRJ2 163 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 IGKV3OR2-268A0A0C4DH90 116 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 C17orf58Q2M2W7 97 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 TMEM70Q9BUB7 260 aa10.59□□□□□ -0.71
VSTM4-202ENST00000332853 TRAV1-1A0A0B4J248 108 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 TRAV41A0A0B4J266 112 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 FBLL1A6NHQ2 334 aaKnown RBP10.58□□□□□ -0.72
VSTM4-202ENST00000332853 TMEM50AO95807 157 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 CD33P20138 364 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 AKAP6Q13023 2319 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 RNASE2P10153 161 aaKnown RBP10.58□□□□□ -0.72
VSTM4-202ENST00000332853 ERVK11-1P61568 191 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 SLC25A34Q6PIV7 304 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 NUDT10Q8NFP7 164 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 NUDT11Q96G61 164 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 A0A1W2PNU3 283 aaPredicted RBP10.58□□□□□ -0.72
VSTM4-202ENST00000332853 TDGF1P13385 188 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 GCSHP23434 173 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 PAX9P55771 341 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 NDPQ00604 133 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 AMMECR1LQ6DCA0 310 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 OSTCQ9NRP0 149 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 CTAG1AP78358 180 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 INTS1Q8N201 2190 aaKnown RBP10.58□□□□□ -0.72
VSTM4-202ENST00000332853 CEACAM8P31997 349 aaPredicted RBP10.58□□□□□ -0.72
VSTM4-202ENST00000332853 PAX8Q06710 450 aa10.58□□□□□ -0.72
VSTM4-202ENST00000332853 NPIPB5A8MRT5 1133 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 C5orf64Q2M2E5 130 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 LINC01551Q86U37 167 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 PMCHL2Q9BQD1 86 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 MMP23AO75900 390 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 IGLV1-44P01699 117 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 SPRNQ5BIV9 151 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 DUX3Q96PT4 197 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 MOB4Q9Y3A3 225 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 A0A1B0GW64 132 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 FGF23Q9GZV9 251 aaPredicted RBP10.57□□□□□ -0.72
VSTM4-202ENST00000332853 NPIPB6E9PJ23 425 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 ZNF134P52741 427 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 SPSB3Q6PJ21 355 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 REC114Q7Z4M0 266 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 OR4X2Q8NGF9 303 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 PCDH15Q96QU1 1955 aa10.57□□□□□ -0.72
VSTM4-202ENST00000332853 A0A1B0GWJ7 208 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 H3BUX3 64 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 RUSC1-AS1Q66K80 236 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 FABP5P3A8MUU1 101 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 NPFFO15130 113 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 ZNF414Q96IQ9 312 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 TRAV9-1A0A075B6T8 112 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 HIST1H4GQ99525 98 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 KIR2DL4Q99706 377 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 A0A1B0GV90 55 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 EVI2AP22794 236 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 SPTBN1Q01082 2364 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms