RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SMIM10Q96HG1 83 aa8.78□□□□□ -1
CLN8-201ENST00000331222 KIF26AQ9ULI4 1882 aaPredicted RBP8.78□□□□□ -1
CLN8-201ENST00000331222 PMS2P5A8MQ11 134 aa8.77□□□□□ -1
CLN8-201ENST00000331222 C10orf55Q5SWW7 151 aa8.77□□□□□ -1
CLN8-201ENST00000331222 NEUROG1Q92886 237 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 TRBV9A0A0B4J1U6 114 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 ZNF98A6NK75 572 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FGFBP3Q8TAT2 258 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 A0A087WWL8 130 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 TRAV13-1A0A0B4J241 112 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 A0A1W2PR77 199 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 HOXA3O43365 443 aaPredicted RBP8.77□□□□□ -1.01
CLN8-201ENST00000331222 OR9G9P0C7N8 305 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 TMEM86BQ8N661 226 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A10PA6NDY2 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A18PA6NE21 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A16PA6NEW6 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A20PA6NIJ5 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A8PA6NJQ4 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A7PA6NKC0 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A22PA8MWA6 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A12PA8MX19 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A5PA8MXJ8 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A23PA8MXZ1 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 TOMM40O96008 361 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A15PP0C7V4 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A13PP0C7W8 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A14PP0C7W9 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 FAM90A24PP0C7X0 464 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 COX5BP10606 129 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 SRSF1Q07955 248 aaKnown RBP eCLIP8.77□□□□□ -1.01
CLN8-201ENST00000331222 ZNF672Q499Z4 452 aaPredicted RBP8.77□□□□□ -1.01
CLN8-201ENST00000331222 PIP4P2Q8N4L2 257 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 TRAV41A0A0B4J266 112 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 IQCF6A8MYZ5 107 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 C1QTNF9P0C862 333 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 CLPSL2Q6UWE3 100 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 C5orf24Q7Z6I8 188 aa8.77□□□□□ -1.01
CLN8-201ENST00000331222 M0R2P5 195 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 C19orf67A6NJJ6 358 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 ZNF876PQ49A33 203 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 IGKV1D-13A0A0B4J2D9 117 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 IGKV1-13P0DP09 117 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 TMEM200BQ69YZ2 307 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 ADAMTS9Q9P2N4 1935 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 SRRM4A7MD48 611 aaKnown RBP8.76□□□□□ -1.01
CLN8-201ENST00000331222 Q0VFX4 171 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 Q8TAT8 98 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 OTORQ9NRC9 128 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 COL4A5P29400 1685 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 IZUMO1RA6ND01 250 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 RTBDNQ9BSG5 229 aaPredicted RBP8.76□□□□□ -1.01
CLN8-201ENST00000331222 LINC00205P59089 165 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 C1orf159Q96HA4 380 aa8.76□□□□□ -1.01
CLN8-201ENST00000331222 TCRAP04437 139 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 C1orf100Q5SVJ3 147 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 LINC01590Q5TEZ4 76 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 SMDT1Q9H4I9 107 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 F5H768 121 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 IGHV1-46P01743 117 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 ALX4Q9H161 411 aaPredicted RBP8.75□□□□□ -1.01
CLN8-201ENST00000331222 F8VVB4 439 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 F8VWA3 439 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 DUSP14O95147 198 aaKnown RBP8.75□□□□□ -1.01
CLN8-201ENST00000331222 PRTN3P24158 256 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 Q96MF0 132 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 EML6Q6ZMW3 1958 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 TMEM14DPA8MWL7 114 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 DPM2O94777 84 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 LYZL4Q96KX0 146 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 PSG8Q9UQ74 426 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 CLDN16Q9Y5I7 305 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 RLFQ13129 1914 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 IGHV2-26A0A0B4J1V2 119 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 SMKR1H3BMG3 65 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 UPK2O00526 184 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 NIT1Q86X76 327 aa8.75□□□□□ -1.01
CLN8-201ENST00000331222 MGAMO43451 1857 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 A0A0G2JNJ9 132 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 MBD3L4A6NDZ8 208 aaPredicted RBP8.74□□□□□ -1.01
CLN8-201ENST00000331222 MBD3L3A6NE82 208 aaPredicted RBP8.74□□□□□ -1.01
CLN8-201ENST00000331222 MBD3L5A6NJ08 208 aaPredicted RBP8.74□□□□□ -1.01
CLN8-201ENST00000331222 NAPSAO96009 420 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 MBD3L2Q8NHZ7 208 aaPredicted RBP8.74□□□□□ -1.01
CLN8-201ENST00000331222 C1QTNF5Q9BXJ0 243 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 Q9UFV3 132 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 CYSLTR1Q9Y271 337 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 STAG3L3P0CL85 134 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 ERCC8Q13216 396 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 C6orf226Q5I0X4 101 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 ZNF114Q8NC26 417 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 MCRIP2Q9BUT9 160 aaKnown RBP8.74□□□□□ -1.01
CLN8-201ENST00000331222 SERF1AO75920 110 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 SSBP2P81877 361 aaPredicted RBP8.74□□□□□ -1.01
CLN8-201ENST00000331222 EPDR1Q9UM22 224 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 UNQ6494/PRO21346Q6UXR6 183 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 CIARTQ8N365 385 aaPredicted RBP8.74□□□□□ -1.01
CLN8-201ENST00000331222 C2orf16Q68DN1 1984 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 PQLC2LA1A4F0 135 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 ZNF562Q6V9R5 426 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms