RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 CHD8Q9HCK8 2581 aa11.68□□□□□ -0.54
SNX20-202ENST00000330943 SPAARA0A1B0GVQ0 90 aa11.68□□□□□ -0.54
SNX20-202ENST00000330943 HSBP1L1C9JCN9 74 aa11.68□□□□□ -0.54
SNX20-202ENST00000330943 IGLV1-44P01699 117 aa11.68□□□□□ -0.54
SNX20-202ENST00000330943 CFHR2P36980 270 aa11.68□□□□□ -0.54
SNX20-202ENST00000330943 ERHP84090 104 aaKnown RBP11.68□□□□□ -0.54
SNX20-202ENST00000330943 VHLLQ6RSH7 139 aa11.68□□□□□ -0.54
SNX20-202ENST00000330943 LHFPL4Q7Z7J7 247 aa11.68□□□□□ -0.54
SNX20-202ENST00000330943 C9orf106Q8NAJ2 232 aa11.68□□□□□ -0.54
SNX20-202ENST00000330943 TMEM178AQ8NBL3 297 aa11.68□□□□□ -0.54
SNX20-202ENST00000330943 CST9LQ9H4G1 147 aa11.68□□□□□ -0.54
SNX20-202ENST00000330943 RPP21Q9H633 154 aaKnown RBP11.68□□□□□ -0.54
SNX20-202ENST00000330943 NAV3Q8IVL0 2385 aa11.67□□□□□ -0.54
SNX20-202ENST00000330943 E7EUB6 86 aa11.67□□□□□ -0.54
SNX20-202ENST00000330943 LINC00322Q6ZN03 302 aaPredicted RBP11.67□□□□□ -0.54
SNX20-202ENST00000330943 PDPNQ86YL7 162 aa11.67□□□□□ -0.54
SNX20-202ENST00000330943 C1orf162Q8NEQ5 155 aaPredicted RBP11.67□□□□□ -0.54
SNX20-202ENST00000330943 HARBI1Q96MB7 349 aa11.67□□□□□ -0.54
SNX20-202ENST00000330943 TMEM191AQ9H0A3 160 aa11.67□□□□□ -0.54
SNX20-202ENST00000330943 FNDC4Q9H6D8 234 aaPredicted RBP11.67□□□□□ -0.54
SNX20-202ENST00000330943 ZNF430Q9H8G1 570 aaPredicted RBP11.67□□□□□ -0.54
SNX20-202ENST00000330943 EPDR1Q9UM22 224 aa11.67□□□□□ -0.54
SNX20-202ENST00000330943 TIMM8BQ9Y5J9 83 aaPredicted RBP11.67□□□□□ -0.54
SNX20-202ENST00000330943 BSNQ9UPA5 3926 aa11.67□□□□□ -0.54
SNX20-202ENST00000330943 GUSBP1Q15486 140 aa11.67□□□□□ -0.54
SNX20-202ENST00000330943 AMMECR1LQ6DCA0 310 aa11.67□□□□□ -0.54
SNX20-202ENST00000330943 LINC00305Q7Z4B0 112 aa11.67□□□□□ -0.54
SNX20-202ENST00000330943 RBMXL3Q8N7X1 1067 aaKnown RBP11.67□□□□□ -0.54
SNX20-202ENST00000330943 PGPA6NDG6 321 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 DEFB125Q8N687 156 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 GTSF1Q8WW33 167 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 CHCHD1Q96BP2 118 aaKnown RBP11.66□□□□□ -0.54
SNX20-202ENST00000330943 GSX1Q9H4S2 264 aaPredicted RBP11.66□□□□□ -0.54
SNX20-202ENST00000330943 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 ASH1LQ9NR48 2969 aaKnown RBP11.66□□□□□ -0.54
SNX20-202ENST00000330943 MOSP00540 346 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 PPBPP02775 128 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 ZNF138P52744 262 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 C1RLQ9NZP8 487 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 SPTAN1Q13813 2472 aaKnown RBP11.66□□□□□ -0.54
SNX20-202ENST00000330943 TCRBV4S1A1TA0A5B7 111 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 A8MWL6 223 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 LHBP01229 141 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 P01737 135 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 TMEM177Q53S58 311 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 OCIAD2Q56VL3 154 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 C10orf55Q5SWW7 151 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 SLC25A48Q6ZT89 311 aaKnown RBP11.66□□□□□ -0.54
SNX20-202ENST00000330943 GPR82Q96P67 336 aa11.66□□□□□ -0.54
SNX20-202ENST00000330943 LRBAP50851 2863 aa11.65□□□□□ -0.54
SNX20-202ENST00000330943 NCOR2Q9Y618 2525 aa11.65□□□□□ -0.54
SNX20-202ENST00000330943 ORM2P19652 201 aa11.65□□□□□ -0.54
SNX20-202ENST00000330943 C12orf54Q6X4T0 127 aa11.65□□□□□ -0.54
SNX20-202ENST00000330943 FAM216BQ8N7L0 139 aa11.65□□□□□ -0.54
SNX20-202ENST00000330943 CCL13Q99616 98 aa11.65□□□□□ -0.54
SNX20-202ENST00000330943 PMCHL2Q9BQD1 86 aa11.65□□□□□ -0.54
SNX20-202ENST00000330943 MRPL20Q9BYC9 149 aaKnown RBP11.65□□□□□ -0.54
SNX20-202ENST00000330943 MRPL36Q9P0J6 103 aaKnown RBP11.65□□□□□ -0.54
SNX20-202ENST00000330943 A0A087X0K7 114 aa11.65□□□□□ -0.54
SNX20-202ENST00000330943 NKX2-8O15522 239 aa11.65□□□□□ -0.54
SNX20-202ENST00000330943 MYCNOSP40205 109 aa11.65□□□□□ -0.54
SNX20-202ENST00000330943 MAP1LC3CQ9BXW4 147 aa11.65□□□□□ -0.54
SNX20-202ENST00000330943 SCRT2Q9NQ03 307 aa11.65□□□□□ -0.54
SNX20-202ENST00000330943 RPUSD1Q9UJJ7 312 aaKnown RBP11.65□□□□□ -0.54
SNX20-202ENST00000330943 IGKV1D-37A0A075B6S9 117 aa11.64□□□□□ -0.55
SNX20-202ENST00000330943 H3BTX0 84 aa11.64□□□□□ -0.55
SNX20-202ENST00000330943 TOX4O94842 621 aa11.64□□□□□ -0.55
SNX20-202ENST00000330943 FSTL3O95633 263 aa11.64□□□□□ -0.55
SNX20-202ENST00000330943 REG1BP48304 166 aa11.64□□□□□ -0.55
SNX20-202ENST00000330943 WT1-ASQ06250 92 aa11.64□□□□□ -0.55
SNX20-202ENST00000330943 DEFB124Q8NES8 71 aa11.64□□□□□ -0.55
SNX20-202ENST00000330943 CSMD1Q96PZ7 3565 aa11.64□□□□□ -0.55
SNX20-202ENST00000330943 CHEK1O14757 476 aa11.64□□□□□ -0.55
SNX20-202ENST00000330943 APOA2P02652 100 aa11.64□□□□□ -0.55
SNX20-202ENST00000330943 NCOR1P1Q9H4R4 102 aa11.64□□□□□ -0.55
SNX20-202ENST00000330943 RAI1Q7Z5J4 1906 aaPredicted RBP11.64□□□□□ -0.55
SNX20-202ENST00000330943 LIPFP07098 398 aa11.63□□□□□ -0.55
SNX20-202ENST00000330943 CCL11P51671 97 aa11.63□□□□□ -0.55
SNX20-202ENST00000330943 OR1B1Q8NGR6 318 aa11.63□□□□□ -0.55
SNX20-202ENST00000330943 OSR1Q8TAX0 266 aaPredicted RBP11.63□□□□□ -0.55
SNX20-202ENST00000330943 GAFA1Q96PS6 74 aa11.63□□□□□ -0.55
SNX20-202ENST00000330943 MLST8Q9BVC4 326 aa11.63□□□□□ -0.55
SNX20-202ENST00000330943 CSN3P07498 182 aa11.63□□□□□ -0.55
SNX20-202ENST00000330943 PSG9Q00887 426 aa11.63□□□□□ -0.55
SNX20-202ENST00000330943 BHLHA15Q7RTS1 189 aaPredicted RBP11.63□□□□□ -0.55
SNX20-202ENST00000330943 DAZAP1Q96EP5 407 aaKnown RBP11.63□□□□□ -0.55
SNX20-202ENST00000330943 MAP1AP78559 2803 aaPredicted RBP11.63□□□□□ -0.55
SNX20-202ENST00000330943 LOC102724200A0A096LPH7 203 aaPredicted RBP11.63□□□□□ -0.55
SNX20-202ENST00000330943 M0R1B8 84 aa11.63□□□□□ -0.55
SNX20-202ENST00000330943 RBPMS2Q6ZRY4 209 aaKnown RBP11.63□□□□□ -0.55
SNX20-202ENST00000330943 PRSS22Q9GZN4 317 aa11.63□□□□□ -0.55
SNX20-202ENST00000330943 KLF12Q9Y4X4 402 aa11.63□□□□□ -0.55
SNX20-202ENST00000330943 SOX21Q9Y651 276 aaPredicted RBP11.63□□□□□ -0.55
SNX20-202ENST00000330943 ZNF71Q9NQZ8 489 aaPredicted RBP11.62□□□□□ -0.55
SNX20-202ENST00000330943 RNF7Q9UBF6 113 aa11.62□□□□□ -0.55
SNX20-202ENST00000330943 ZNF835Q9Y2P0 537 aa11.62□□□□□ -0.55
SNX20-202ENST00000330943 NBEAP1P0C6P0 100 aa11.62□□□□□ -0.55
SNX20-202ENST00000330943 RPS20P60866 119 aaKnown RBP11.62□□□□□ -0.55
SNX20-202ENST00000330943 PET117Q6UWS5 81 aa11.62□□□□□ -0.55
SNX20-202ENST00000330943 SMIM15Q7Z3B0 74 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms