RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 GNG5P63218 68 aa12.34□□□□□ -0.43
BRCC3-201ENST00000330045 ETFRF1Q6IPR1 90 aa12.34□□□□□ -0.43
BRCC3-201ENST00000330045 STXBP6Q8NFX7 210 aa12.34□□□□□ -0.43
BRCC3-201ENST00000330045 PERPQ96FX8 193 aa12.34□□□□□ -0.43
BRCC3-201ENST00000330045 TNFRSF19Q9NS68 423 aa12.34□□□□□ -0.43
BRCC3-201ENST00000330045 NAV3Q8IVL0 2385 aa12.33□□□□□ -0.43
BRCC3-201ENST00000330045 COL6A6A6NMZ7 2263 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 C22orf46C9J442 243 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 MOSP00540 346 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 RPLP1P05386 114 aaKnown RBP12.33□□□□□ -0.44
BRCC3-201ENST00000330045 LGALS7P47929 136 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 UBE2G1P62253 170 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 MRGPRG-AS1Q2M3A8 158 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 HCP5Q6MZN7 132 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 NIT1Q86X76 327 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 FAM19A2Q8N3H0 131 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 OR1B1Q8NGR6 318 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 C18orf32Q8TCD1 76 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 MRPL27Q9P0M9 148 aaKnown RBP12.33□□□□□ -0.44
BRCC3-201ENST00000330045 EPDR1Q9UM22 224 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 SLC25A5P05141 298 aaKnown RBP12.33□□□□□ -0.44
BRCC3-201ENST00000330045 HIST1H1EP10412 219 aaKnown RBP12.33□□□□□ -0.44
BRCC3-201ENST00000330045 RUSC1-AS1Q66K80 236 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 BLNKQ8WV28 456 aa12.33□□□□□ -0.44
BRCC3-201ENST00000330045 IGHV3-72A0A0B4J1Y9 119 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 IGLC7A0M8Q6 106 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 PGPA6NDG6 321 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 VSTM5A8MXK1 200 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 CRYGCP07315 174 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 C3orf79P0CE67 100 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 IGHV1-8P0DP01 117 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 PRRX1P54821 245 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 TMEM155Q4W5P6 130 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 C7orf69Q9H7B7 122 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 ZNF25P17030 456 aaPredicted RBP12.32□□□□□ -0.44
BRCC3-201ENST00000330045 NTF3P20783 257 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 CTRLP40313 264 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 SPATA45Q537H7 98 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 GDF5OSQ5U4N7 250 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 ZNF841Q6ZN19 808 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 C19orf35Q6ZS72 473 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 RNASE6Q93091 150 aaKnown RBP12.32□□□□□ -0.44
BRCC3-201ENST00000330045 BORCS7Q96B45 105 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 KAAG1Q9UBP8 84 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 POLEQ07864 2286 aa12.32□□□□□ -0.44
BRCC3-201ENST00000330045 HIGD1CA8MV81 97 aa12.31□□□□□ -0.44
BRCC3-201ENST00000330045 TEX45Q8NA69 505 aa12.31□□□□□ -0.44
BRCC3-201ENST00000330045 SGK494Q96LW2 274 aa12.31□□□□□ -0.44
BRCC3-201ENST00000330045 TRGV9Q99603 122 aa12.31□□□□□ -0.44
BRCC3-201ENST00000330045 CORTO00230 105 aa12.31□□□□□ -0.44
BRCC3-201ENST00000330045 NBEAP1P0C6P0 100 aa12.31□□□□□ -0.44
BRCC3-201ENST00000330045 PVRIGQ6DKI7 326 aa12.31□□□□□ -0.44
BRCC3-201ENST00000330045 LHFPL4Q7Z7J7 247 aa12.31□□□□□ -0.44
BRCC3-201ENST00000330045 C22orf15Q8WYQ4 148 aa12.31□□□□□ -0.44
BRCC3-201ENST00000330045 RPL27AP46776 148 aaKnown RBP12.3□□□□□ -0.44
BRCC3-201ENST00000330045 TNXAQ16473 311 aa12.3□□□□□ -0.44
BRCC3-201ENST00000330045 SMIM12Q96EX1 92 aa12.3□□□□□ -0.44
BRCC3-201ENST00000330045 GPR82Q96P67 336 aa12.3□□□□□ -0.44
BRCC3-201ENST00000330045 TMEM133Q9H2Q1 129 aa12.3□□□□□ -0.44
BRCC3-201ENST00000330045 DYNLRB1Q9NP97 96 aa12.3□□□□□ -0.44
BRCC3-201ENST00000330045 KLF12Q9Y4X4 402 aa12.3□□□□□ -0.44
BRCC3-201ENST00000330045 PLXNB1O43157 2135 aa12.3□□□□□ -0.44
BRCC3-201ENST00000330045 C11orf42Q8N5U0 333 aa12.3□□□□□ -0.44
BRCC3-201ENST00000330045 TMEM116Q8NCL8 245 aa12.3□□□□□ -0.44
BRCC3-201ENST00000330045 RPH3ALQ9UNE2 315 aa12.3□□□□□ -0.44
BRCC3-201ENST00000330045 LRBAP50851 2863 aa12.3□□□□□ -0.44
BRCC3-201ENST00000330045 HYPMO75409 117 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 APELAP0DMC3 54 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 FOSL1P15407 271 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 CAMPP49913 170 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 KLF5Q13887 457 aaPredicted RBP12.29□□□□□ -0.44
BRCC3-201ENST00000330045 BATFQ16520 125 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 SSBP4Q9BWG4 385 aaPredicted RBP12.29□□□□□ -0.44
BRCC3-201ENST00000330045 JKAMPQ9P055 326 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 ZNF835Q9Y2P0 537 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 CACNA1AO00555 2505 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 IGHV3-21A0A0B4J1V1 117 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 VWC2LB2RUY7 222 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 HSBP1O75506 76 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 OR2J3O76001 311 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 CA7P43166 264 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 GPR6P46095 362 aaPredicted RBP12.29□□□□□ -0.44
BRCC3-201ENST00000330045 ATP5L2Q7Z4Y8 100 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 ALKBH7Q9BT30 221 aaPredicted RBP12.29□□□□□ -0.44
BRCC3-201ENST00000330045 WNT10AQ9GZT5 417 aa12.29□□□□□ -0.44
BRCC3-201ENST00000330045 A6NNC1 897 aa12.28□□□□□ -0.44
BRCC3-201ENST00000330045 CNTFRP26992 372 aa12.28□□□□□ -0.44
BRCC3-201ENST00000330045 SSX8Q7RTT4 187 aa12.28□□□□□ -0.44
BRCC3-201ENST00000330045 MLST8Q9BVC4 326 aa12.28□□□□□ -0.44
BRCC3-201ENST00000330045 PKDREJQ9NTG1 2253 aa12.28□□□□□ -0.44
BRCC3-201ENST00000330045 A0A1B0GXF2 115 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 CRYGBP07316 175 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 GP9P14770 177 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 C5orf17Q8NAS9 161 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 C8orf46Q8TAG6 207 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 FMC1Q96HJ9 113 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 TMEM208Q9BTX3 173 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 CLEC7AQ9BXN2 247 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 RPP21Q9H633 154 aaKnown RBP12.27□□□□□ -0.45
BRCC3-201ENST00000330045 UQCR10Q9UDW1 63 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms