RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 NRN1Q9NPD7 142 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 C22orf46C9J442 243 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 DIRC3C9JPN6 131 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 TACC2O95359 2948 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 GPX1P07203 203 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 Q0VG73 95 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 SLAQ13239 276 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 PLGLAQ15195 96 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 PNKDQ8N490 385 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 ST6GALNAC6Q969X2 333 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 INSIG2Q9Y5U4 225 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 IGHV1-69-2A0A0G2JMI3 117 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 C22orf15Q8WYQ4 148 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 FXYD5Q96DB9 178 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 ZNF835Q9Y2P0 537 aa11.29□□□□□ -0.6
ATP2C1-201ENST00000328560 HLA-DQA1P01909 254 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 APOBEC3AP31941 199 aaPredicted RBP11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 MC5RP33032 325 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 TMEM183BQ1AE95 376 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 LBHQ53QV2 105 aaPredicted RBP11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 ATOH7Q8N100 152 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 IGFBPL1Q8WX77 278 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 KIR2DL5BA0A0G2JN68 375 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 KIR2DL5BA0A0G2JPC4 375 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 A0A1W2PS18 150 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 IZUMO1RA6ND01 250 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 TMEM155Q4W5P6 130 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 KIR2DL5AQ8N109 375 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 LINC01560Q8TB33 94 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 TMEM133Q9H2Q1 129 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 SMIM27A0A1W2PRY6 76 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 PERPQ96FX8 193 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 FBXL15Q9H469 300 aa11.28□□□□□ -0.6
ATP2C1-201ENST00000328560 K7ENP7 123 aa11.27□□□□□ -0.61
ATP2C1-201ENST00000328560 NBEAP1P0C6P0 100 aa11.27□□□□□ -0.61
ATP2C1-201ENST00000328560 LYZP61626 148 aa11.27□□□□□ -0.61
ATP2C1-201ENST00000328560 NUP35Q8NFH5 326 aa11.27□□□□□ -0.61
ATP2C1-201ENST00000328560 OR4A5Q8NH83 315 aa11.27□□□□□ -0.61
ATP2C1-201ENST00000328560 WNT10AQ9GZT5 417 aa11.27□□□□□ -0.61
ATP2C1-201ENST00000328560 PTPRQQ9UMZ3 2332 aa11.27□□□□□ -0.61
ATP2C1-201ENST00000328560 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.27□□□□□ -0.61
ATP2C1-201ENST00000328560 HIGD1CA8MV81 97 aa11.27□□□□□ -0.61
ATP2C1-201ENST00000328560 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
ATP2C1-201ENST00000328560 TCF24Q7RTU0 167 aa11.27□□□□□ -0.61
ATP2C1-201ENST00000328560 OR2D3Q8NGH3 330 aa11.27□□□□□ -0.61
ATP2C1-201ENST00000328560 ANKHD1Q8IWZ3 2542 aaKnown RBP11.26□□□□□ -0.61
ATP2C1-201ENST00000328560 IGLC7A0M8Q6 106 aa11.26□□□□□ -0.61
ATP2C1-201ENST00000328560 VKORC1Q9BQB6 163 aa11.26□□□□□ -0.61
ATP2C1-201ENST00000328560 EPDR1Q9UM22 224 aa11.26□□□□□ -0.61
ATP2C1-201ENST00000328560 B9A039 149 aa11.26□□□□□ -0.61
ATP2C1-201ENST00000328560 HYPMO75409 117 aa11.26□□□□□ -0.61
ATP2C1-201ENST00000328560 LGALS7P47929 136 aa11.26□□□□□ -0.61
ATP2C1-201ENST00000328560 KCNS1Q96KK3 526 aa11.26□□□□□ -0.61
ATP2C1-201ENST00000328560 NEU1Q99519 415 aa11.26□□□□□ -0.61
ATP2C1-201ENST00000328560 SHISA9B4DS77 424 aa11.26□□□□□ -0.61
ATP2C1-201ENST00000328560 RBP4P02753 201 aa11.26□□□□□ -0.61
ATP2C1-201ENST00000328560 CD24P25063 80 aa11.26□□□□□ -0.61
ATP2C1-201ENST00000328560 ARHGAP32A7KAX9 2087 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 IGHV2-26A0A0B4J1V2 119 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 A0A1W2PRD5 423 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 A0A1W2PRF3 423 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 A0A1W2PRM7 423 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 CCL21O00585 134 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 LY6HO94772 140 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 ETFRF1Q6IPR1 90 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 COL6A6A6NMZ7 2263 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 WNK2Q9Y3S1 2297 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 ZNF324O75467 553 aaPredicted RBP11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 HSBP1O75506 76 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 CNIH1O95406 144 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 ESDP10768 282 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 DLX6P56179 175 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 RNASEKQ6P5S7 137 aaKnown RBP11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 TEX43Q6ZNM6 134 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 LINC00311Q8N616 119 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 RPEQ96AT9 228 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 BORCS7Q96B45 105 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 A6NNC1 897 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 PRRX1P54821 245 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 LCN12Q6JVE5 192 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 ZNF841Q6ZN19 808 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 MUC15Q8N387 334 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 THAP8Q8NA92 274 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 RALYQ9UKM9 306 aaKnown RBP11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 S4R3C0 116 aa11.25□□□□□ -0.61
ATP2C1-201ENST00000328560 CACNA1BQ00975 2339 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 TRAV8-1A0A0A6YYK1 113 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 COX19Q49B96 90 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 OR10J3Q5JRS4 329 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 GDF5OSQ5U4N7 250 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 C11orf42Q8N5U0 333 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 TSKUQ8WUA8 353 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 GRAMD2BQ96HH9 432 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 ASCL2Q99929 193 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 MIEN1Q9BRT3 115 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 ONECUT1Q9UBC0 465 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 HIST1H1EP10412 219 aaKnown RBP11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 ZNF137PP52743 207 aa11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 FOXA3P55318 350 aaPredicted RBP11.24□□□□□ -0.61
ATP2C1-201ENST00000328560 SIGLEC9Q9Y336 463 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms