RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 HBZP02008 142 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 HIST1H1DP16402 221 aaKnown RBP0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 TUBG1P23258 451 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 PSMA1P25786 263 aaKnown RBP0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 MIPP30301 263 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 SNCAP37840 140 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 SLCO1A2P46721 670 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 PSMD7P51665 324 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 OR2B6P58173 313 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 MMDQ15546 238 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 SNCBQ16143 134 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF404Q494X3 552 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 DEFB121Q5J5C9 76 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 Q5VV11 94 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 FAM45BPQ6NSW5 357 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 ERICH5Q6P6B1 374 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 HAGHLQ6PII5 290 aaPredicted RBP0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 C2orf82Q6UX34 121 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 SCGB1D4Q6XE38 83 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 MARCH3Q86UD3 253 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 PACRGLQ8N7B6 248 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 YIPF7Q8N8F6 280 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 ZIC4Q8N9L1 334 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 ADTRPQ96IZ2 230 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 TBX5Q99593 518 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 GTSF1LQ9H1H1 148 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 MED28Q9H204 178 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 BATF3Q9NR55 127 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 TUBG2Q9NRH3 451 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 KLF12Q9Y4X4 402 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 MPC1Q9Y5U8 109 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 IGHV3-43A0A0B4J1X8 118 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 A0A1B0GU33 70 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF729A6NN14 1252 aaPredicted RBP0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 EFCAB9A8MZ26 197 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 SSNA1O43805 119 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 CST8O60676 142 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 NDUFB2O95178 105 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 RPSAP08865 295 aaKnown RBP0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 OR12D1P0DN82 309 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 S100A2P29034 98 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 AGTR1P30556 359 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 SULT1A2P50226 295 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 OR10A3P58181 314 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 HIST1H4AP62805 103 aaKnown RBP0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 HIST1H3AP68431 136 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 H3F3AP84243 136 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 GTF2BQ00403 316 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 HOXC5Q00444 222 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 BATFQ16520 125 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 IZUMO2Q6UXV1 221 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 DGAT2L6Q6ZPD8 337 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 HIST2H3AQ71DI3 136 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 DEFB128Q7Z7B8 93 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 SLC51BQ86UW2 128 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 CRLF3Q8IUI8 442 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 OR6V1Q8N148 313 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 WFDC9Q8NEX5 89 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 OR4P4Q8NGL7 312 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 OR51H1Q8NH63 302 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 C12orf43Q96C57 262 aaKnown RBP0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 MED10Q9BTT4 135 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 BPESC1Q9GZL8 116 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 HRASLSQ9HDD0 168 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 ACOT13Q9NPJ3 140 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 FKBP14Q9NWM8 211 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 FAM206AQ9NX38 181 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 EMC3Q9P0I2 261 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 DOK5Q9P104 306 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 AK3Q9UIJ7 227 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 SLC22A13Q9Y226 551 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 PI4KAP42356 2102 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 A0A1B0GX51 115 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 RBFOX3A6NFN3 312 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 FNDC10F2Z333 226 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 F5H5K5 113 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 EPPINO95925 133 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 SERPINA1P01009 418 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 NPPAP01160 153 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 OCMP0CE72 109 aaPredicted RBP0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 PET100P0DJ07 73 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 GZMBP10144 247 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 ZNF3P17036 446 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 SPI1P17947 270 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 MP68P56378 58 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 TAS2R45P59539 299 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 TMEM258P61165 79 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 DCDP81605 110 aaKnown RBP0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 SKP2Q13309 424 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 NOXRED1Q6NXP6 359 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 LRRN1Q6UXK5 716 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 CLEC20AQ6ZU45 233 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 GLT6D1Q7Z4J2 308 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 DEFB119Q8N690 84 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 CCL17Q92583 94 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 TAMM41Q96BW9 452 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 TPT1P8Q9HAU6 139 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 NRBP2Q9NSY0 501 aa0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 RBFOX1Q9NWB1 397 aaKnown RBP0.53□□□□□ -2.33
CCDC144A-201ENST00000328495 MRPL27Q9P0M9 148 aaKnown RBP0.53□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms