RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 TRAV30A0A087WSZ9 112 aa11.73□□□□□ -0.53
TPM3-205ENST00000328159 SH2D7A6NKC9 451 aaPredicted RBP11.73□□□□□ -0.53
TPM3-205ENST00000328159 GGTLC3B5MD39 225 aa11.73□□□□□ -0.53
TPM3-205ENST00000328159 OR2J3O76001 311 aa11.73□□□□□ -0.53
TPM3-205ENST00000328159 HIST1H1BP16401 226 aaKnown RBP11.73□□□□□ -0.53
TPM3-205ENST00000328159 ELOBQ15370 118 aa11.73□□□□□ -0.53
TPM3-205ENST00000328159 ECSCRQ19T08 205 aa11.73□□□□□ -0.53
TPM3-205ENST00000328159 LINC01551Q86U37 167 aa11.73□□□□□ -0.53
TPM3-205ENST00000328159 SSX3Q99909 188 aa11.73□□□□□ -0.53
TPM3-205ENST00000328159 TMUB1Q9BVT8 246 aa11.73□□□□□ -0.53
TPM3-205ENST00000328159 SOX21Q9Y651 276 aaPredicted RBP11.73□□□□□ -0.53
TPM3-205ENST00000328159 GNG7O60262 68 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 TOMM40O96008 361 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 AVPP01185 164 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 SUMO1P63165 101 aaKnown RBP11.72□□□□□ -0.53
TPM3-205ENST00000328159 DEFB113Q30KQ7 82 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 Q8WTZ3 238 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 C21orf62Q9NYP8 219 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 URGCP-MRPS24S4R325 110 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
TPM3-205ENST00000328159 TRBV20OR9-2A0A075B6H5 130 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 CRYBB3P26998 211 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 FLI1Q01543 452 aaPredicted RBP11.72□□□□□ -0.53
TPM3-205ENST00000328159 KLK9Q2XQG4 91 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 Q56UQ5 140 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 LRRC75A-AS1Q8N1F1 130 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 TMEM68Q96MH6 324 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 MRPL27Q9P0M9 148 aaKnown RBP11.72□□□□□ -0.53
TPM3-205ENST00000328159 FBXL7Q9UJT9 491 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 KLK9Q9UKQ9 250 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 PTPN13Q12923 2485 aa11.72□□□□□ -0.53
TPM3-205ENST00000328159 PGPEP1LA6NFU8 196 aa11.71□□□□□ -0.54
TPM3-205ENST00000328159 LINC01548A6NM66 108 aa11.71□□□□□ -0.54
TPM3-205ENST00000328159 F8W735 103 aaPredicted RBP11.71□□□□□ -0.54
TPM3-205ENST00000328159 H7BYZ3 331 aa11.71□□□□□ -0.54
TPM3-205ENST00000328159 RPL35P42766 123 aaKnown RBP11.71□□□□□ -0.54
TPM3-205ENST00000328159 YPEL3P61236 119 aaPredicted RBP11.71□□□□□ -0.54
TPM3-205ENST00000328159 LOXL1Q08397 574 aaPredicted RBP11.71□□□□□ -0.54
TPM3-205ENST00000328159 ANAPC16Q96DE5 110 aa11.71□□□□□ -0.54
TPM3-205ENST00000328159 ELOVL1Q9BW60 279 aa11.71□□□□□ -0.54
TPM3-205ENST00000328159 SLC25A39Q9BZJ4 359 aaPredicted RBP11.71□□□□□ -0.54
TPM3-205ENST00000328159 POLQO75417 2590 aa11.71□□□□□ -0.54
TPM3-205ENST00000328159 CRYBG3Q68DQ2 2970 aa11.7□□□□□ -0.54
TPM3-205ENST00000328159 TGIF2-C20orf24A0A0A6YYL0 155 aa11.7□□□□□ -0.54
TPM3-205ENST00000328159 C9JCJ5 164 aa11.7□□□□□ -0.54
TPM3-205ENST00000328159 J3QLI3 93 aa11.7□□□□□ -0.54
TPM3-205ENST00000328159 AMY1AP04745 511 aa11.7□□□□□ -0.54
TPM3-205ENST00000328159 CXCL1P09341 107 aa11.7□□□□□ -0.54
TPM3-205ENST00000328159 VN1R17PQ8TDU5 208 aa11.7□□□□□ -0.54
TPM3-205ENST00000328159 AURKAIP1Q9NWT8 199 aaPredicted RBP11.7□□□□□ -0.54
TPM3-205ENST00000328159 FBN2P35556 2912 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 WI2-2373I1.2A0A1W2PRP0 233 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 A6NDX4 124 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 C1orf196B1AJZ1 125 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 RNF223E7ERA6 249 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 G3V318 75 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 H3BUX3 64 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 IGHV3-23P01764 117 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 PLA2G2AP14555 144 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 GP9P14770 177 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 LY6EQ16553 131 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 LEMD1Q68G75 181 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 ZNF329Q86UD4 541 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 ZNF491Q8N8L2 437 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 OCC1Q8TAD7 63 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 C2CD4CQ8TF44 421 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 RNF125Q96EQ8 232 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 TXN2Q99757 166 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 KMT2BQ9UMN6 2715 aaPredicted RBP11.69□□□□□ -0.54
TPM3-205ENST00000328159 HELTA6NFD8 242 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 NBEAP1P0C6P0 100 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 CD99P14209 185 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 FCGR2BP31994 310 aaPredicted RBP11.69□□□□□ -0.54
TPM3-205ENST00000328159 RAB5BP61020 215 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 MAPK1IP1LQ8NDC0 245 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 SHANK2-AS3Q9BTD1 123 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 TMEM14CQ9P0S9 112 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 LY96Q9Y6Y9 160 aa11.69□□□□□ -0.54
TPM3-205ENST00000328159 H3BRN7 92 aa11.68□□□□□ -0.54
TPM3-205ENST00000328159 SCGB2A1O75556 95 aa11.68□□□□□ -0.54
TPM3-205ENST00000328159 TGFAP01135 160 aa11.68□□□□□ -0.54
TPM3-205ENST00000328159 IL4P05112 153 aa11.68□□□□□ -0.54
TPM3-205ENST00000328159 SNRPCP09234 159 aaKnown RBP11.68□□□□□ -0.54
TPM3-205ENST00000328159 RHOGP84095 191 aa11.68□□□□□ -0.54
TPM3-205ENST00000328159 Q5PR19 223 aa11.68□□□□□ -0.54
TPM3-205ENST00000328159 ZFP82Q8N141 532 aa11.68□□□□□ -0.54
TPM3-205ENST00000328159 BLNKQ8WV28 456 aa11.68□□□□□ -0.54
TPM3-205ENST00000328159 OR5B12Q96R08 314 aa11.68□□□□□ -0.54
TPM3-205ENST00000328159 CR1P17927 2039 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 TRBV9A0A0B4J1U6 114 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 OR2T8A6NH00 312 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 HNF1AP20823 631 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 MYCNOSP40205 109 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 RPS10P46783 165 aaKnown RBP11.67□□□□□ -0.54
TPM3-205ENST00000328159 GALR1P47211 349 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 CENPWQ5EE01 88 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 CHD6Q8TD26 2715 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 TRBV24-1A0A075B6N3 115 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 TRAV41A0A0B4J266 112 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 MDFIC2A0A1B0GVS7 189 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms