RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TRAV13-1A0A0B4J241 112 aa13.6□□□□□ -0.23
SMAD3-201ENST00000327367 TRGV4A0A0C4DH28 118 aa13.6□□□□□ -0.23
SMAD3-201ENST00000327367 CSTL1Q9H114 145 aa13.6□□□□□ -0.23
SMAD3-201ENST00000327367 DOCK1Q14185 1865 aa13.6□□□□□ -0.23
SMAD3-201ENST00000327367 TRAV3A0A0B4J244 114 aa13.6□□□□□ -0.23
SMAD3-201ENST00000327367 F2Z2F3 143 aa13.6□□□□□ -0.23
SMAD3-201ENST00000327367 ATP5J2P56134 94 aa13.6□□□□□ -0.23
SMAD3-201ENST00000327367 TMEM30BQ3MIR4 351 aa13.6□□□□□ -0.23
SMAD3-201ENST00000327367 STHQ8IWL8 128 aa13.6□□□□□ -0.23
SMAD3-201ENST00000327367 A0A1B0GW64 132 aa13.6□□□□□ -0.23
SMAD3-201ENST00000327367 LILRA1O75019 489 aa13.6□□□□□ -0.23
SMAD3-201ENST00000327367 ZCCHC24Q8N2G6 241 aaKnown RBP13.6□□□□□ -0.23
SMAD3-201ENST00000327367 K7EP13 123 aa13.59□□□□□ -0.23
SMAD3-201ENST00000327367 K7ERJ3 54 aa13.59□□□□□ -0.23
SMAD3-201ENST00000327367 TM4SF5O14894 197 aa13.59□□□□□ -0.23
SMAD3-201ENST00000327367 IGHV3-53P01767 116 aa13.59□□□□□ -0.23
SMAD3-201ENST00000327367 MORN5Q5VZ52 161 aa13.59□□□□□ -0.23
SMAD3-201ENST00000327367 ZNF688P0C7X2 276 aa13.59□□□□□ -0.23
SMAD3-201ENST00000327367 SLC25A48Q6ZT89 311 aaKnown RBP13.59□□□□□ -0.23
SMAD3-201ENST00000327367 BOD1L2Q8IYS8 172 aa13.59□□□□□ -0.23
SMAD3-201ENST00000327367 LINC00479Q96M42 142 aa13.59□□□□□ -0.23
SMAD3-201ENST00000327367 DPH3P1Q9H4G8 78 aa13.59□□□□□ -0.23
SMAD3-201ENST00000327367 C9orf118A6NHY6 69 aa13.59□□□□□ -0.23
SMAD3-201ENST00000327367 TRACP01848 142 aa13.59□□□□□ -0.23
SMAD3-201ENST00000327367 J3QRE1 110 aa13.58□□□□□ -0.23
SMAD3-201ENST00000327367 ARFGEF1Q9Y6D6 1849 aa13.58□□□□□ -0.24
SMAD3-201ENST00000327367 ASPHD1Q5U4P2 390 aa13.58□□□□□ -0.24
SMAD3-201ENST00000327367 PVRIGQ6DKI7 326 aa13.58□□□□□ -0.24
SMAD3-201ENST00000327367 SLC50A1Q9BRV3 221 aa13.58□□□□□ -0.24
SMAD3-201ENST00000327367 NBR2O15453 112 aa13.58□□□□□ -0.24
SMAD3-201ENST00000327367 RHOGP84095 191 aa13.58□□□□□ -0.24
SMAD3-201ENST00000327367 PRCDQ00LT1 54 aa13.58□□□□□ -0.24
SMAD3-201ENST00000327367 C14orf178Q8N769 122 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-201ENST00000327367 CCL19Q99731 98 aa13.58□□□□□ -0.24
SMAD3-201ENST00000327367 CHCHD2Q9Y6H1 151 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-201ENST00000327367 LINC00205P59089 165 aa13.58□□□□□ -0.24
SMAD3-201ENST00000327367 PLEKHB2Q96CS7 222 aa13.58□□□□□ -0.24
SMAD3-201ENST00000327367 ARAP2Q8WZ64 1704 aa13.57□□□□□ -0.24
SMAD3-201ENST00000327367 IGHV2OR16-5A0A0B4J2B6 119 aa13.57□□□□□ -0.24
SMAD3-201ENST00000327367 GHRHP01286 108 aa13.57□□□□□ -0.24
SMAD3-201ENST00000327367 GAGE12HA6NDE8 117 aa13.57□□□□□ -0.24
SMAD3-201ENST00000327367 DUTP33316 252 aaKnown RBP13.57□□□□□ -0.24
SMAD3-201ENST00000327367 LINC00114Q6XXX2 140 aa13.57□□□□□ -0.24
SMAD3-201ENST00000327367 TEX43Q6ZNM6 134 aa13.57□□□□□ -0.24
SMAD3-201ENST00000327367 Q6ZT83 130 aa13.57□□□□□ -0.24
SMAD3-201ENST00000327367 IGHV1-2P23083 117 aa13.57□□□□□ -0.24
SMAD3-201ENST00000327367 BSPH1Q075Z2 132 aa13.57□□□□□ -0.24
SMAD3-201ENST00000327367 WBP1Q96G27 269 aa13.57□□□□□ -0.24
SMAD3-201ENST00000327367 B5MCH6 92 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 RNF144BQ7Z419 303 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 TRAV12-1A0A0B4J245 112 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 SUMO4Q6EEV6 95 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 SIGLEC15Q6ZMC9 328 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 ADAMTSL1Q8N6G6 1762 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 MCM3APO60318 1980 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 CACNA1DQ01668 2161 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 A0A087WWL8 130 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 LEPROTO15243 131 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 NDPQ00604 133 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 FGFBP3Q8TAT2 258 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 SLC25A39Q9BZJ4 359 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-201ENST00000327367 CDPF1Q6NVV7 123 aa13.56□□□□□ -0.24
SMAD3-201ENST00000327367 TRBV20-1A0A075B6N2 111 aa13.55□□□□□ -0.24
SMAD3-201ENST00000327367 YPEL1O60688 119 aa13.55□□□□□ -0.24
SMAD3-201ENST00000327367 Q6ZWC4 215 aa13.55□□□□□ -0.24
SMAD3-201ENST00000327367 YPEL2Q96QA6 119 aa13.55□□□□□ -0.24
SMAD3-201ENST00000327367 MRPL27Q9P0M9 148 aaKnown RBP13.55□□□□□ -0.24
SMAD3-201ENST00000327367 COLCA1Q6ZS62 124 aa13.55□□□□□ -0.24
SMAD3-201ENST00000327367 IGLV3-21P80748 117 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-201ENST00000327367 ZNF581Q9P0T4 197 aa13.55□□□□□ -0.24
SMAD3-201ENST00000327367 LINC00312Q9Y6C7 94 aa13.55□□□□□ -0.24
SMAD3-201ENST00000327367 IGKV1-12A0A0C4DH73 117 aa13.55□□□□□ -0.24
SMAD3-201ENST00000327367 LYNX1G3V0Z9 82 aa13.55□□□□□ -0.24
SMAD3-201ENST00000327367 IGKV1D-12P01611 117 aa13.55□□□□□ -0.24
SMAD3-201ENST00000327367 LYNX1P0DP58 116 aa13.55□□□□□ -0.24
SMAD3-201ENST00000327367 TMEM126AQ9H061 195 aa13.55□□□□□ -0.24
SMAD3-201ENST00000327367 ZNF114Q8NC26 417 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 K7EP34 96 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 CDK2AP2O75956 126 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 SELLP14151 372 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 NTF4P34130 210 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 C11orf44Q8N8P7 122 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 FAM57AQ8TBR7 257 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 DLEC1Q9Y238 1755 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 TRAV1-1A0A0B4J248 108 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 RASL11AQ6T310 242 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 PRADC1Q9BSG0 188 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 LAMB2P55268 1798 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 COX6B1P14854 86 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 ANKRD36A6QL64 1941 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 APOBEC3AP31941 199 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-201ENST00000327367 TIMM21Q9BVV7 248 aa13.54□□□□□ -0.24
SMAD3-201ENST00000327367 TPRP12270 2363 aaKnown RBP13.54□□□□□ -0.24
SMAD3-201ENST00000327367 B9A039 149 aa13.53□□□□□ -0.24
SMAD3-201ENST00000327367 H3BMG7 143 aa13.53□□□□□ -0.24
SMAD3-201ENST00000327367 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.53□□□□□ -0.24
SMAD3-201ENST00000327367 ERCC8Q13216 396 aa13.53□□□□□ -0.24
SMAD3-201ENST00000327367 ARHGEF17Q96PE2 2063 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-201ENST00000327367 IQCF6A8MYZ5 107 aa13.53□□□□□ -0.24
SMAD3-201ENST00000327367 CFHR2P36980 270 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms