RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 Q9H3A6 140 aa10.15□□□□□ -0.79
CACNA1F-201ENST00000323022 CIARTQ8N365 385 aaPredicted RBP10.15□□□□□ -0.79
CACNA1F-201ENST00000323022 SLC25A39Q9BZJ4 359 aaPredicted RBP10.15□□□□□ -0.79
CACNA1F-201ENST00000323022 ESPL1Q14674 2120 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 EFNA2O43921 213 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 TMEM50AO95807 157 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 HIST2H2BCQ6DN03 193 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 A0A1B0GWB2 263 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 UPK2O00526 184 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 LDLRAD4O15165 306 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 GRNP28799 593 aaKnown RBP10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 FHITP49789 147 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 A0A1B0GUT8 65 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 MST1LQ2TV78 715 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 RPP21Q9H633 154 aaKnown RBP10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 CGAP01215 116 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 PAX2Q02962 417 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 PIKFYVEQ9Y2I7 2098 aa10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 RIF1Q5UIP0 2472 aaKnown RBP10.14□□□□□ -0.79
CACNA1F-201ENST00000323022 PIP4P1Q86T03 277 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 SDHCQ99643 169 aaPredicted RBP10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 NPCDR1Q9BY65 106 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 CCDC88CQ9P219 2028 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 AKAP6Q13023 2319 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 BUB1B-PAK6H3BSN5 160 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 TMEM86BQ8N661 226 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 OR2K2Q8NGT1 345 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 A0A1B0GW15 77 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 HLA-DQB1P01920 261 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 UCP3P55916 312 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 USMG5Q96IX5 58 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 COL4A6Q14031 1691 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 ANXA2RQ3ZCQ2 193 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 OR10W1Q8NGF6 305 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 ZFC3H1O60293 1989 aaKnown RBP10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 POLEQ07864 2286 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 TRBV5-7A0A0A0MS05 114 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 CD5P06127 495 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 CD28P10747 220 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 C10orf55Q5SWW7 151 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 TNFRSF14Q92956 283 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 RHPN1-AS1Q9BWJ2 59 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 C5orf66Q9H5L9 145 aa10.13□□□□□ -0.79
CACNA1F-201ENST00000323022 YPEL1O60688 119 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 IGHV4-39P01824 125 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 IGHG3P01860 377 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 CBLN1P23435 193 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 PVRIGQ6DKI7 326 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 RNF182Q8N6D2 247 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 YPEL2Q96QA6 119 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 ASCL2Q99929 193 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 TRBV7-1A0A0A6YYK4 115 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 K7EM74 188 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 LINC00158P58513 81 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 Q6AWC8 147 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 DTX1Q86Y01 620 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 PAX9P55771 341 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 H2BFSP57053 126 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 RPL36AP83881 106 aaKnown RBP10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 TMEM155Q4W5P6 130 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 FAM120AOSQ5T036 256 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 RPL36ALQ969Q0 106 aaKnown RBP10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 CHD5Q8TDI0 1954 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 ATRAIDQ6UW56 229 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 FBLIM1Q8WUP2 373 aa10.12□□□□□ -0.79
CACNA1F-201ENST00000323022 F8WEM9 126 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 SNAI2O43623 268 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 NDUFS7O75251 213 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 GNG5P63218 68 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 PSMG3Q9BT73 122 aaPredicted RBP10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 DOPEY2Q9Y3R5 2298 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 IGHV2-70DA0A0C4DH43 119 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 NPIPB13A6NJU9 1138 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 SRRM4A7MD48 611 aaKnown RBP10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 ORMDL3Q8N138 153 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 TMEM256Q8N2U0 113 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 TSSC4Q9Y5U2 329 aaPredicted RBP10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 DIDO1Q9BTC0 2240 aaKnown RBP10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 C15orf61A6NNL5 157 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 TFF3Q07654 80 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 C5orf64Q2M2E5 130 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 TMEM144Q7Z5S9 345 aa10.11□□□□□ -0.79
CACNA1F-201ENST00000323022 FAM223BA6NKX1 122 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 TYMSP04818 313 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 CTAG1AP78358 180 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 ZNF124Q15973 351 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 FAM223AQ8IWN6 122 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 GREB1Q4ZG55 1949 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 OTORQ9NRC9 128 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 NCOR1O75376 2440 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 RLFQ13129 1914 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 IGHV3-64A0A075B6Q5 118 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 OOSP1A8MZH6 123 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 FLVCR1-AS1Q8TAF5 88 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 JPT2Q9H910 190 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 ALPK2Q86TB3 2170 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 FABP5P3A8MUU1 101 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 DEFB112Q30KQ8 113 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 GAFA1Q96PS6 74 aa10.1□□□□□ -0.79
CACNA1F-201ENST00000323022 IL36BQ9NZH7 164 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms