RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 UNQ9165/PRO28630Q6UXU0 137 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 THAP8Q8NA92 274 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 OR1B1Q8NGR6 318 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 VSIRQ9H7M9 311 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 EDN2P20800 178 aa11.84□□□□□ -0.51
PDLIM5-202ENST00000318007 B2MP61769 119 aa11.84□□□□□ -0.51
PDLIM5-202ENST00000318007 RAB31Q13636 194 aa11.84□□□□□ -0.51
PDLIM5-202ENST00000318007 RPEL1Q2QD12 228 aa11.84□□□□□ -0.51
PDLIM5-202ENST00000318007 SLC51BQ86UW2 128 aa11.84□□□□□ -0.51
PDLIM5-202ENST00000318007 BAP18Q8IXM2 172 aa11.84□□□□□ -0.51
PDLIM5-202ENST00000318007 OR2G3Q8NGZ4 309 aa11.84□□□□□ -0.51
PDLIM5-202ENST00000318007 UHRF2Q96PU4 802 aa11.84□□□□□ -0.51
PDLIM5-202ENST00000318007 FNDC10F2Z333 226 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 HOXD3P31249 432 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 FFAR4Q5NUL3 377 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 C3orf56Q8N813 242 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 OR51G1Q8NGK1 321 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 RAX2Q96IS3 184 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 TXN2Q99757 166 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 IGHV3-66A0A0C4DH42 116 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 ADARB2-AS1A8MUL3 147 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 OR5G3P0C626 314 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 C4BPBP20851 252 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 SYNJ2BPP57105 145 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 OR1N2Q8NGR9 330 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 PCNPQ8WW12 178 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 DPF1Q92782 380 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 TRGV9Q99603 122 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 MDFIQ99750 246 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 SLC45A2Q9UMX9 530 aa11.83□□□□□ -0.52
PDLIM5-202ENST00000318007 TRAV30A0A087WSZ9 112 aa11.82□□□□□ -0.52
PDLIM5-202ENST00000318007 C17orf112F2Z3M2 114 aa11.82□□□□□ -0.52
PDLIM5-202ENST00000318007 HMGB3O15347 200 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-202ENST00000318007 GGCTO75223 188 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-202ENST00000318007 FHITP49789 147 aa11.82□□□□□ -0.52
PDLIM5-202ENST00000318007 C12orf54Q6X4T0 127 aa11.82□□□□□ -0.52
PDLIM5-202ENST00000318007 ZNF414Q96IQ9 312 aa11.82□□□□□ -0.52
PDLIM5-202ENST00000318007 GINS3Q9BRX5 216 aa11.82□□□□□ -0.52
PDLIM5-202ENST00000318007 MPDU1O75352 247 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 FCGR2BP31994 310 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 RAB2AP61019 212 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 LEMD1Q68G75 181 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 TOMM20LQ6UXN7 152 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 Q8WTZ3 238 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 SLC39A9Q9NUM3 307 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 GAR1Q9NY12 217 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 LINC01619G3V211 115 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 CCL24O00175 119 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 SCGB2A1O75556 95 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 TSPAN15O95858 294 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 TOMM40O96008 361 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 HSPB1P04792 205 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 SNRPCP09234 159 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 RELQ04864 619 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 SPSB3Q6PJ21 355 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 Q6ZRG5 221 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 STOML3Q8TAV4 291 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 RNF125Q96EQ8 232 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 CITED1Q99966 193 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 PLA2G2EQ9NZK7 142 aa11.81□□□□□ -0.52
PDLIM5-202ENST00000318007 A0A1B0GV50 99 aa11.8□□□□□ -0.52
PDLIM5-202ENST00000318007 SPP1P10451 314 aa11.8□□□□□ -0.52
PDLIM5-202ENST00000318007 TM4SF20Q53R12 229 aa11.8□□□□□ -0.52
PDLIM5-202ENST00000318007 ZNF600Q6ZNG1 722 aa11.8□□□□□ -0.52
PDLIM5-202ENST00000318007 GNPNAT1Q96EK6 184 aaPredicted RBP11.8□□□□□ -0.52
PDLIM5-202ENST00000318007 RPL29P47914 159 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 PRR20EP86478 221 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 PRR20CP86479 221 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 PRR20DP86480 221 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 PRR20BP86481 221 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 PRR20AP86496 221 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 FAM209BQ5JX69 171 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 TMEM37Q8WXS4 190 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 SLC25A22Q9H936 323 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 COX7A2P2O60397 106 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 APOHP02749 345 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 YPEL3P61236 119 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 MORN5Q5VZ52 161 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 SPATA31B1PQ5VZV4 182 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 NDUFA11Q86Y39 141 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 DLX4Q92988 240 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 PARD6GQ9BYG4 376 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 ARV1Q9H2C2 271 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 ZFAND3Q9H8U3 227 aa11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 SEPSECSQ9HD40 501 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-202ENST00000318007 PF4P02776 101 aa11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 EIF5AP63241 154 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 AKR1C8PQ5T2L2 129 aa11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 FAM122CQ6P4D5 195 aa11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 FABP1P07148 127 aa11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 SELENOTP62341 195 aa11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 FAM78BQ5VT40 261 aa11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 TEX261Q6UWH6 196 aa11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 PATE2Q6UY27 113 aa11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 LINC00305Q7Z4B0 112 aa11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 OR10G4Q8NGN3 311 aa11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 OR10G9Q8NGN4 311 aa11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 OR10G7Q8NGN6 311 aa11.78□□□□□ -0.52
PDLIM5-202ENST00000318007 SPATA3Q8NHX4 192 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms