RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 ZNF319Q9P2F9 582 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 TMEM240Q5SV17 173 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 DEFB124Q8NES8 71 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 SRXN1Q9BYN0 137 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 PTGDSP41222 190 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 EXOC3-AS1Q8N2X6 119 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 TMEM238C9JI98 176 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 COL11A2P13942 1736 aaPredicted RBP7.32□□□□□ -1.24
USF3-201ENST00000316407 FAM201AQ5SY85 155 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 EEF1AKMT3Q96AZ1 226 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 TOMM40O96008 361 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 IFI27L2Q9H2X8 130 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 KIF26AQ9ULI4 1882 aaPredicted RBP7.31□□□□□ -1.24
USF3-201ENST00000316407 SAA2-SAA4A0A096LPE2 208 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 C16orf97H3BN30 126 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 SAA2P0DJI9 122 aaPredicted RBP7.31□□□□□ -1.24
USF3-201ENST00000316407 LINC00158P58513 81 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 TSKUQ8WUA8 353 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 TRGV2A0A075B6R0 118 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 CD24P25063 80 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 CTSBP07858 339 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 CLEC19AQ6UXS0 136 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 TRAV12-1A0A0B4J245 112 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 GGTLC1Q9BX51 225 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 ORMDL2Q53FV1 153 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 YAE1D1Q9NRH1 226 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 PAX4O43316 350 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 MPZP25189 248 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 EFNB3Q15768 340 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 NCOR1P1Q9H4R4 102 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 TRACP01848 142 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 RIF1Q5UIP0 2472 aaKnown RBP7.31□□□□□ -1.24
USF3-201ENST00000316407 A0A1W2PRX2 142 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 IGKV1D-33P01593 117 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 IGKV1-33P01594 117 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 HTN3P15516 51 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 SLC25A47Q6Q0C1 308 aa7.31□□□□□ -1.24
USF3-201ENST00000316407 FGF16O43320 207 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 SHISA5Q8N114 240 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 NUP35Q8NFH5 326 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 PILRBQ9UKJ0 227 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 GAGE1Q13065 139 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 ARPC1AQ92747 370 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 MLNRO43193 412 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 TMEM242Q9NWH2 141 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 SHANK3Q9BYB0 1731 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 TMEM8BA6NDV4 472 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 LINC01587Q99440 93 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A10PA6NDY2 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A18PA6NE21 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A16PA6NEW6 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A20PA6NIJ5 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A8PA6NJQ4 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A7PA6NKC0 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A22PA8MWA6 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A12PA8MX19 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A5PA8MXJ8 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A23PA8MXZ1 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A15PP0C7V4 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A13PP0C7W8 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A14PP0C7W9 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FAM90A24PP0C7X0 464 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 TCF15Q12870 199 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FBXL7Q9UJT9 491 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 VWC2LB2RUY7 222 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 C12orf77C9JDV5 145 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 OSTCQ9NRP0 149 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 FOXS1O43638 330 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 TM4SF4P48230 202 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 SPATA31B1PQ5VZV4 182 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 RPL15P61313 204 aaKnown RBP7.3□□□□□ -1.24
USF3-201ENST00000316407 C3orf36Q3SXR2 165 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 LINC01551Q86U37 167 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 JPT2Q9H910 190 aa7.3□□□□□ -1.24
USF3-201ENST00000316407 B5MCH6 92 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 IGHV3-11P01762 117 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 TRGV3P03979 118 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 ETDBQ3ZM63 59 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 K7EP13 123 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 ADCYAP1P18509 176 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 ACP7Q6ZNF0 438 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 ABHD17AQ96GS6 310 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 SFXN3Q9BWM7 321 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 LINC01590Q5TEZ4 76 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 ASPHD1Q5U4P2 390 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 OTORQ9NRC9 128 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 TMEM86BQ8N661 226 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 PAPPA2Q9BXP8 1791 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 GAGE12HA6NDE8 117 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 SMIM20Q8N5G0 67 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 ZNF106Q9H2Y7 1883 aaKnown RBP7.29□□□□□ -1.24
USF3-201ENST00000316407 CELA3BP08861 270 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 WNT2P09544 360 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 SELLP14151 372 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 CCL1P22362 96 aa7.29□□□□□ -1.24
USF3-201ENST00000316407 DEFB123Q8N688 67 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 PCNX3Q9H6A9 2034 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 H3BMG7 143 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 LEPROTO15243 131 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 C21orf62Q9NYP8 219 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 295.1 ms