RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 BPESC1Q9GZL8 116 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 COMMD5Q9GZQ3 224 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 ZNF430Q9H8G1 570 aaPredicted RBP6.12□□□□□ -1.43
TRIM55-202ENST00000315962 KCNIP2Q9NS61 270 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 RPH3ALQ9UNE2 315 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 S4R3C0 116 aa6.12□□□□□ -1.43
TRIM55-202ENST00000315962 TRAV5A0A0B4J249 113 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 APOA2P02652 100 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 VDAC2P45880 294 aaPredicted RBP6.11□□□□□ -1.43
TRIM55-202ENST00000315962 HINT1P49773 126 aaPredicted RBP6.11□□□□□ -1.43
TRIM55-202ENST00000315962 HSPE1P61604 102 aaKnown RBP6.11□□□□□ -1.43
TRIM55-202ENST00000315962 ATP6V1FQ16864 119 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 SPATA45Q537H7 98 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 MORN5Q5VZ52 161 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 ZNF833PQ6ZTB9 187 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 SIGLECL1Q8N7X8 197 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 STPG4Q8N801 248 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 SLC24A4Q8NFF2 622 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 FAM168AQ92567 244 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 NABP2Q9BQ15 211 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 SSBP4Q9BWG4 385 aaPredicted RBP6.11□□□□□ -1.43
TRIM55-202ENST00000315962 PLEKHA3Q9HB20 300 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 TMEM14BQ9NUH8 114 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 SH2D7A6NKC9 451 aaPredicted RBP6.11□□□□□ -1.43
TRIM55-202ENST00000315962 H3BTX0 84 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 ZNF253O75346 499 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 STAG3L2P0CL84 134 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 STAG3L3P0CL85 134 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 NPY1RP25929 384 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 SUMO1P63165 101 aaKnown RBP6.11□□□□□ -1.43
TRIM55-202ENST00000315962 SSBP2P81877 361 aaPredicted RBP6.11□□□□□ -1.43
TRIM55-202ENST00000315962 HES1Q14469 280 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 RAB1CQ92928 201 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 RPEQ96AT9 228 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 TIMD4Q96H15 378 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 CIB3Q96Q77 187 aaPredicted RBP6.11□□□□□ -1.43
TRIM55-202ENST00000315962 TXN2Q99757 166 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 FBXL15Q9H469 300 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 LINC00574Q9H8X3 128 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 DNAJC4Q9NNZ3 241 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 KAAG1Q9UBP8 84 aa6.11□□□□□ -1.43
TRIM55-202ENST00000315962 HELZ2Q9BYK8 2649 aaKnown RBP6.11□□□□□ -1.43
TRIM55-202ENST00000315962 SONP18583 2426 aaKnown RBP6.11□□□□□ -1.43
TRIM55-202ENST00000315962 H0Y8G0 127 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 RPL8P62917 257 aaKnown RBP6.1□□□□□ -1.43
TRIM55-202ENST00000315962 PLGLAQ15195 96 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 TMEM183BQ1AE95 376 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 C11orf71Q6IPW1 123 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 UNQ5815/PRO19632Q6UWF5 114 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 OR5AN1Q8NGI8 311 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 OR4C13Q8NGP0 309 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 EAF1Q96JC9 268 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-202ENST00000315962 MIEN1Q9BRT3 115 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 GSX1Q9H4S2 264 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-202ENST00000315962 RAB9BQ9NP90 201 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 NRN1Q9NPD7 142 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 IL36BQ9NZH7 164 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 SETD2Q9BYW2 2564 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-202ENST00000315962 LOC105371242A0A075B767 164 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 IGKV1OR2-108A0A075B7D4 117 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 HSBP1L1C9JCN9 74 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 BUB1B-PAK6H3BSN5 160 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 UPK2O00526 184 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 TOX4O94842 621 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 CXorf1O96002 111 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 AREGP15514 252 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 GNG4P50150 75 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 WT1-ASQ06250 92 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 FOXL1Q12952 345 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 TNXAQ16473 311 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 RPEL1Q2QD12 228 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 Q6ZN92 141 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 SSX8Q7RTT4 187 aa6.1□□□□□ -1.43
TRIM55-202ENST00000315962 PARD6GQ9BYG4 376 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-202ENST00000315962 ANKRD17O75179 2603 aaKnown RBP6.1□□□□□ -1.43
TRIM55-202ENST00000315962 PIGBOS1A0A0B4J2F0 54 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 TIMM23O14925 209 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 CAMPP49913 170 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 VWC2Q2TAL6 325 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 TEX43Q6ZNM6 134 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 TCTEX1D1Q8N7M0 179 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 MAPK1IP1LQ8NDC0 245 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 ZC2HC1AQ96GY0 325 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 ASCL2Q99929 193 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 CLEC7AQ9BXN2 247 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 V9GYV3 84 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 ZNF469Q96JG9 3925 aaPredicted RBP6.09□□□□□ -1.43
TRIM55-202ENST00000315962 IGHV1-3A0A0C4DH29 117 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 GGTLC3B5MD39 225 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 PYYP10082 97 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 TCTAP57738 103 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 SLAQ13239 276 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 Q56UQ5 140 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 KLF17Q5JT82 389 aaPredicted RBP6.09□□□□□ -1.43
TRIM55-202ENST00000315962 DYNAPQ8N1N2 210 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 KIR3DL3Q8N743 410 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.09□□□□□ -1.43
TRIM55-202ENST00000315962 TMEM186Q96B77 213 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 WASHC3Q9Y3C0 194 aa6.09□□□□□ -1.43
TRIM55-202ENST00000315962 MXRA5Q9NR99 2828 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms