RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 LINC00305Q7Z4B0 112 aa10.83□□□□□ -0.68
SKA3-202ENST00000314759 TRAV17A0A0B4J275 112 aa10.83□□□□□ -0.68
SKA3-202ENST00000314759 INS-IGF2F8WCM5 200 aa10.83□□□□□ -0.68
SKA3-202ENST00000314759 APOA2P02652 100 aa10.83□□□□□ -0.68
SKA3-202ENST00000314759 PLA2G2CQ5R387 149 aa10.83□□□□□ -0.68
SKA3-202ENST00000314759 TCF24Q7RTU0 167 aa10.83□□□□□ -0.68
SKA3-202ENST00000314759 OR5AN1Q8NGI8 311 aa10.83□□□□□ -0.68
SKA3-202ENST00000314759 EPDR1Q9UM22 224 aa10.83□□□□□ -0.68
SKA3-202ENST00000314759 hADV38S2A0JD32 116 aa10.82□□□□□ -0.68
SKA3-202ENST00000314759 BPIFB3P59826 476 aa10.82□□□□□ -0.68
SKA3-202ENST00000314759 IGFL2Q6UWQ7 119 aa10.82□□□□□ -0.68
SKA3-202ENST00000314759 LINC00322Q6ZN03 302 aaPredicted RBP10.82□□□□□ -0.68
SKA3-202ENST00000314759 ATP5L2Q7Z4Y8 100 aa10.82□□□□□ -0.68
SKA3-202ENST00000314759 LHFPL4Q7Z7J7 247 aa10.82□□□□□ -0.68
SKA3-202ENST00000314759 FLYWCH2Q96CP2 140 aaKnown RBP10.82□□□□□ -0.68
SKA3-202ENST00000314759 CHRDL1Q9BU40 450 aa10.82□□□□□ -0.68
SKA3-202ENST00000314759 PLXNB1O43157 2135 aa10.82□□□□□ -0.68
SKA3-202ENST00000314759 SYS1-DBNDD2H3BUS1 97 aa10.82□□□□□ -0.68
SKA3-202ENST00000314759 TMEM30BQ3MIR4 351 aa10.82□□□□□ -0.68
SKA3-202ENST00000314759 TMEM177Q53S58 311 aa10.82□□□□□ -0.68
SKA3-202ENST00000314759 DEFB125Q8N687 156 aa10.82□□□□□ -0.68
SKA3-202ENST00000314759 BLNKQ8WV28 456 aa10.82□□□□□ -0.68
SKA3-202ENST00000314759 IGHV1-24A0A0C4DH33 117 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 DIAPH2-AS1Q14236 149 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 RUSC1-AS1Q66K80 236 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 LINC00312Q9Y6C7 94 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 MBD3L4A6NDZ8 208 aaPredicted RBP10.81□□□□□ -0.68
SKA3-202ENST00000314759 MBD3L3A6NE82 208 aaPredicted RBP10.81□□□□□ -0.68
SKA3-202ENST00000314759 MBD3L5A6NJ08 208 aaPredicted RBP10.81□□□□□ -0.68
SKA3-202ENST00000314759 SLC25A5P05141 298 aaKnown RBP10.81□□□□□ -0.68
SKA3-202ENST00000314759 SP9P0CG40 484 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 CCL3L1P16619 93 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 SSX8Q7RTT4 187 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 PDPNQ86YL7 162 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 RBMXL3Q8N7X1 1067 aaKnown RBP10.81□□□□□ -0.68
SKA3-202ENST00000314759 THAP8Q8NA92 274 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 MBD3L2Q8NHZ7 208 aaPredicted RBP10.81□□□□□ -0.68
SKA3-202ENST00000314759 TMEM167AQ8TBQ9 72 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 ST20Q9HBF5 79 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 KLF12Q9Y4X4 402 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 SELENOKQ9Y6D0 94 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 A0A087X0K7 114 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 PGPA6NDG6 321 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 H0Y8G0 127 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 MOSP00540 346 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 ZNF138P52744 262 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 PSG9Q00887 426 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 GUCD1Q96NT3 240 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 GPR82Q96P67 336 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 PMCHL2Q9BQD1 86 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 MLST8Q9BVC4 326 aa10.81□□□□□ -0.68
SKA3-202ENST00000314759 COLQQ9Y215 455 aaPredicted RBP10.81□□□□□ -0.68
SKA3-202ENST00000314759 RP1L1Q8IWN7 2480 aaPredicted RBP10.81□□□□□ -0.68
SKA3-202ENST00000314759 DYSFO75923 2080 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 TRAV8-6A0A0B4J262 113 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 CRXO43186 299 aaPredicted RBP10.8□□□□□ -0.68
SKA3-202ENST00000314759 ORM2P19652 201 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 HBBP68871 147 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 SLC25A34Q6PIV7 304 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 C22orf34Q6ZV56 151 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 RPRMLQ8N4K4 120 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 GTSF1Q8WW33 167 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 RPH3ALQ9UNE2 315 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 DCHS1Q96JQ0 3298 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 TEX36Q5VZQ5 186 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 OR4C13Q8NGP0 309 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 PRSS22Q9GZN4 317 aa10.8□□□□□ -0.68
SKA3-202ENST00000314759 C22orf46C9J442 243 aa10.79□□□□□ -0.68
SKA3-202ENST00000314759 RPP21Q9H633 154 aaKnown RBP10.79□□□□□ -0.68
SKA3-202ENST00000314759 ZNF835Q9Y2P0 537 aa10.79□□□□□ -0.68
SKA3-202ENST00000314759 GAGE12BA1L429 117 aa10.79□□□□□ -0.68
SKA3-202ENST00000314759 FCN3O75636 299 aa10.79□□□□□ -0.68
SKA3-202ENST00000314759 IGLV2-23P01705 113 aa10.79□□□□□ -0.68
SKA3-202ENST00000314759 SUB1P53999 127 aaKnown RBP eCLIP10.79□□□□□ -0.68
SKA3-202ENST00000314759 SMIM15Q7Z3B0 74 aa10.79□□□□□ -0.68
SKA3-202ENST00000314759 ZCCHC24Q8N2G6 241 aaKnown RBP10.79□□□□□ -0.68
SKA3-202ENST00000314759 OR1B1Q8NGR6 318 aa10.79□□□□□ -0.68
SKA3-202ENST00000314759 ROS1P08922 2347 aa10.79□□□□□ -0.68
SKA3-202ENST00000314759 SNAI2O43623 268 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 LEPROTL1O95214 131 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 CCL8P80075 99 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 SMIM12Q96EX1 92 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 PGLYRP4Q96LB8 373 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 CSTL1Q9H114 145 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 SCRT2Q9NQ03 307 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 LAMA5O15230 3695 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 NBEAP1P0C6P0 100 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 ZNF137PP52743 207 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 TMEM200BQ69YZ2 307 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 OR4A5Q8NH83 315 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 VSTM2AQ8TAG5 236 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 TPSG1Q9NRR2 321 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 TIMM8BQ9Y5J9 83 aaPredicted RBP10.78□□□□□ -0.68
SKA3-202ENST00000314759 A0A1W2PPI3 338 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 A8MWL6 223 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 STXBP6Q8NFX7 210 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 PERPQ96FX8 193 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 RITA1Q96K30 269 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 SSUH2Q9Y2M2 353 aa10.78□□□□□ -0.68
SKA3-202ENST00000314759 ABCA1O95477 2261 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms