RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 THAP8Q8NA92 274 aa10.7□□□□□ -0.7
PPP1CA-201ENST00000312989 OR51G1Q8NGK1 321 aa10.7□□□□□ -0.7
PPP1CA-201ENST00000312989 TMEM231Q9H6L2 316 aa10.7□□□□□ -0.7
PPP1CA-201ENST00000312989 LCE6AA0A183 80 aa10.69□□□□□ -0.7
PPP1CA-201ENST00000312989 SPRY2O43597 315 aa10.69□□□□□ -0.7
PPP1CA-201ENST00000312989 SCGB2A1O75556 95 aa10.69□□□□□ -0.7
PPP1CA-201ENST00000312989 PAX9P55771 341 aa10.69□□□□□ -0.7
PPP1CA-201ENST00000312989 CMC4P56277 68 aaPredicted RBP10.69□□□□□ -0.7
PPP1CA-201ENST00000312989 POLR2GP62487 172 aaKnown RBP eCLIP10.69□□□□□ -0.7
PPP1CA-201ENST00000312989 PAFAH1B2P68402 229 aa10.69□□□□□ -0.7
PPP1CA-201ENST00000312989 RNF125Q96EQ8 232 aa10.69□□□□□ -0.7
PPP1CA-201ENST00000312989 GRAMD2BQ96HH9 432 aa10.69□□□□□ -0.7
PPP1CA-201ENST00000312989 TMEM182Q6ZP80 229 aaPredicted RBP10.68□□□□□ -0.7
PPP1CA-201ENST00000312989 TRPT1Q86TN4 253 aaKnown RBP10.68□□□□□ -0.7
PPP1CA-201ENST00000312989 MITD1Q8WV92 249 aa10.68□□□□□ -0.7
PPP1CA-201ENST00000312989 C17orf77Q96MU5 243 aa10.68□□□□□ -0.7
PPP1CA-201ENST00000312989 CSTL1Q9H114 145 aa10.68□□□□□ -0.7
PPP1CA-201ENST00000312989 C20orf85Q9H1P6 137 aa10.68□□□□□ -0.7
PPP1CA-201ENST00000312989 A0A0J9YWU9 116 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 A6NHS1 94 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 H3BP45 60 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 WRBO00258 174 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 LYRM1O43325 122 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 ZNF688P0C7X2 276 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 INPP1P49441 399 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 LINC00299Q6ZSB3 139 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 STXBP6Q8NFX7 210 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 IL17DQ8TAD2 202 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 SLC35E1Q96K37 410 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 TRGV9Q99603 122 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 RABAC1Q9UI14 185 aa10.67□□□□□ -0.7
PPP1CA-201ENST00000312989 ZFP92A6NM28 416 aa10.66□□□□□ -0.7
PPP1CA-201ENST00000312989 DNASE2O00115 360 aaPredicted RBP10.66□□□□□ -0.7
PPP1CA-201ENST00000312989 MED6O75586 246 aa10.66□□□□□ -0.7
PPP1CA-201ENST00000312989 CCNKO75909 580 aa10.66□□□□□ -0.7
PPP1CA-201ENST00000312989 C4BPBP20851 252 aa10.66□□□□□ -0.7
PPP1CA-201ENST00000312989 EIF2B2P49770 351 aaKnown RBP10.66□□□□□ -0.7
PPP1CA-201ENST00000312989 RPL11P62913 178 aaKnown RBP10.66□□□□□ -0.7
PPP1CA-201ENST00000312989 OR8G2PQ6IF36 304 aa10.66□□□□□ -0.7
PPP1CA-201ENST00000312989 COQ8AQ8NI60 647 aa10.66□□□□□ -0.7
PPP1CA-201ENST00000312989 CIB3Q96Q77 187 aaPredicted RBP10.66□□□□□ -0.7
PPP1CA-201ENST00000312989 TBC1D24Q9ULP9 559 aa10.66□□□□□ -0.7
PPP1CA-201ENST00000312989 VPS13DQ5THJ4 4388 aa10.66□□□□□ -0.7
PPP1CA-201ENST00000312989 HELTA6NFD8 242 aa10.65□□□□□ -0.7
PPP1CA-201ENST00000312989 KNCNA6PVL3 124 aa10.65□□□□□ -0.7
PPP1CA-201ENST00000312989 CENPXA8MT69 81 aa10.65□□□□□ -0.7
PPP1CA-201ENST00000312989 SOCS3O14543 225 aa10.65□□□□□ -0.7
PPP1CA-201ENST00000312989 ATF4P18848 351 aaPredicted RBP10.65□□□□□ -0.7
PPP1CA-201ENST00000312989 RAB11AP62491 216 aa10.65□□□□□ -0.7
PPP1CA-201ENST00000312989 CNPY1Q3B7I2 92 aa10.65□□□□□ -0.7
PPP1CA-201ENST00000312989 SPANXN5Q5MJ07 72 aa10.65□□□□□ -0.7
PPP1CA-201ENST00000312989 TMEM14EPQ6UXP3 125 aa10.65□□□□□ -0.7
PPP1CA-201ENST00000312989 ACOT7LQ6ZUV0 252 aa10.65□□□□□ -0.7
PPP1CA-201ENST00000312989 CCDC32Q9BV29 185 aa10.65□□□□□ -0.7
PPP1CA-201ENST00000312989 RCL1Q9Y2P8 373 aaKnown RBP10.65□□□□□ -0.7
PPP1CA-201ENST00000312989 TCRBP04435 133 aa10.65□□□□□ -0.71
PPP1CA-201ENST00000312989 NKX2-1P43699 371 aaPredicted RBP10.65□□□□□ -0.71
PPP1CA-201ENST00000312989 OR2F1Q13607 317 aa10.65□□□□□ -0.71
PPP1CA-201ENST00000312989 C4orf46Q504U0 113 aa10.65□□□□□ -0.71
PPP1CA-201ENST00000312989 GSG1LQ6UXU4 331 aa10.65□□□□□ -0.71
PPP1CA-201ENST00000312989 SIGLEC15Q6ZMC9 328 aa10.65□□□□□ -0.71
PPP1CA-201ENST00000312989 C11orf1Q9H5F2 150 aa10.65□□□□□ -0.71
PPP1CA-201ENST00000312989 NRN1Q9NPD7 142 aa10.65□□□□□ -0.71
PPP1CA-201ENST00000312989 CA1P00915 261 aaPredicted RBP10.64□□□□□ -0.71
PPP1CA-201ENST00000312989 GATA2P23769 480 aaPredicted RBP10.64□□□□□ -0.71
PPP1CA-201ENST00000312989 IFITM3Q01628 133 aa10.64□□□□□ -0.71
PPP1CA-201ENST00000312989 ZBTB8BQ8NAP8 495 aaPredicted RBP10.64□□□□□ -0.71
PPP1CA-201ENST00000312989 CSNK1G2-AS1Q8NCQ2 148 aa10.64□□□□□ -0.71
PPP1CA-201ENST00000312989 GATAD1Q8WUU5 269 aa10.64□□□□□ -0.71
PPP1CA-201ENST00000312989 NARS2Q96I59 477 aaKnown RBP10.64□□□□□ -0.71
PPP1CA-201ENST00000312989 SMIM8Q96KF7 97 aa10.64□□□□□ -0.71
PPP1CA-201ENST00000312989 PBDC1Q9BVG4 233 aa10.64□□□□□ -0.71
PPP1CA-201ENST00000312989 WDR12Q9GZL7 423 aaKnown RBP10.64□□□□□ -0.71
PPP1CA-201ENST00000312989 SEPSECSQ9HD40 501 aaKnown RBP10.64□□□□□ -0.71
PPP1CA-201ENST00000312989 SSSCA1O60232 199 aa10.63□□□□□ -0.71
PPP1CA-201ENST00000312989 AP2S1P53680 142 aaPredicted RBP10.63□□□□□ -0.71
PPP1CA-201ENST00000312989 LYZP61626 148 aa10.63□□□□□ -0.71
PPP1CA-201ENST00000312989 IAH1Q2TAA2 248 aaPredicted RBP10.63□□□□□ -0.71
PPP1CA-201ENST00000312989 RAB40CQ96S21 281 aa10.63□□□□□ -0.71
PPP1CA-201ENST00000312989 SEC22CQ9BRL7 303 aa10.63□□□□□ -0.71
PPP1CA-201ENST00000312989 NUDT15Q9NV35 164 aa10.63□□□□□ -0.71
PPP1CA-201ENST00000312989 PAIP2BQ9ULR5 123 aaKnown RBP10.63□□□□□ -0.71
PPP1CA-201ENST00000312989 STRAPQ9Y3F4 350 aaKnown RBP10.63□□□□□ -0.71
PPP1CA-201ENST00000312989 KMT2AQ03164 3969 aa10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 TRAV6A0A075B6T7 132 aa10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 SNRPGP15A8MWD9 76 aa10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 CCSO14618 274 aa10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 MBPP02686 304 aaPredicted RBP10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 DEFB1P60022 68 aa10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 RPP30P78346 268 aaKnown RBP10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 ARL16Q0P5N6 197 aa10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 PSMG4Q5JS54 123 aa10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 C1orf194Q5T5A4 169 aa10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 TMEM144Q7Z5S9 345 aa10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 Q8NAQ8 132 aa10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 PSENENQ9NZ42 101 aa10.62□□□□□ -0.71
PPP1CA-201ENST00000312989 C7orf66A4D0T2 115 aa10.61□□□□□ -0.71
PPP1CA-201ENST00000312989 IFNA21P01568 189 aa10.61□□□□□ -0.71
PPP1CA-201ENST00000312989 IL15RAQ13261 267 aa10.61□□□□□ -0.71
PPP1CA-201ENST00000312989 ACTL10Q5JWF8 245 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms