RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 SMIM12Q96EX1 92 aa11.02□□□□□ -0.65
SEC23A-201ENST00000307712 SS18L1O75177 396 aaPredicted RBP11.01□□□□□ -0.65
SEC23A-201ENST00000307712 TRIP6Q15654 476 aaKnown RBP11.01□□□□□ -0.65
SEC23A-201ENST00000307712 ZNF414Q96IQ9 312 aa11.01□□□□□ -0.65
SEC23A-201ENST00000307712 TRAV30A0A087WSZ9 112 aa11.01□□□□□ -0.65
SEC23A-201ENST00000307712 CCL25O15444 150 aa11.01□□□□□ -0.65
SEC23A-201ENST00000307712 ZNF134P52741 427 aa11.01□□□□□ -0.65
SEC23A-201ENST00000307712 TMUB1Q9BVT8 246 aa11.01□□□□□ -0.65
SEC23A-201ENST00000307712 OR2T8A6NH00 312 aa11.01□□□□□ -0.65
SEC23A-201ENST00000307712 DEFB124Q8NES8 71 aa11.01□□□□□ -0.65
SEC23A-201ENST00000307712 COLQQ9Y215 455 aaPredicted RBP11.01□□□□□ -0.65
SEC23A-201ENST00000307712 ZNF257Q9Y2Q1 563 aa11.01□□□□□ -0.65
SEC23A-201ENST00000307712 SOX21Q9Y651 276 aaPredicted RBP11.01□□□□□ -0.65
SEC23A-201ENST00000307712 MED13Q9UHV7 2174 aa11.01□□□□□ -0.65
SEC23A-201ENST00000307712 RNFT1Q5M7Z0 435 aa11□□□□□ -0.65
SEC23A-201ENST00000307712 Q6ZR03 302 aa11□□□□□ -0.65
SEC23A-201ENST00000307712 FAM90A1Q86YD7 464 aa11□□□□□ -0.65
SEC23A-201ENST00000307712 FMC1Q96HJ9 113 aa11□□□□□ -0.65
SEC23A-201ENST00000307712 MKI67P46013 3256 aaKnown RBP11□□□□□ -0.65
SEC23A-201ENST00000307712 HIST1H1AQ02539 215 aaPredicted RBP11□□□□□ -0.65
SEC23A-201ENST00000307712 TMEM186Q96B77 213 aa11□□□□□ -0.65
SEC23A-201ENST00000307712 C5orf30Q96GV9 206 aa11□□□□□ -0.65
SEC23A-201ENST00000307712 PRELID3AQ96N28 172 aa11□□□□□ -0.65
SEC23A-201ENST00000307712 RNASE2P10153 161 aaKnown RBP11□□□□□ -0.65
SEC23A-201ENST00000307712 KIR2DL2P43627 348 aaPredicted RBP11□□□□□ -0.65
SEC23A-201ENST00000307712 MBNL2Q5VZF2 373 aaKnown RBP11□□□□□ -0.65
SEC23A-201ENST00000307712 ATP5L2Q7Z4Y8 100 aa11□□□□□ -0.65
SEC23A-201ENST00000307712 CIARTQ8N365 385 aaPredicted RBP11□□□□□ -0.65
SEC23A-201ENST00000307712 RNASE8Q8TDE3 154 aaKnown RBP11□□□□□ -0.65
SEC23A-201ENST00000307712 NUP210LQ5VU65 1888 aa11□□□□□ -0.65
SEC23A-201ENST00000307712 ARFGEF3Q5TH69 2177 aa10.99□□□□□ -0.65
SEC23A-201ENST00000307712 TMEM249Q2WGJ8 235 aa10.99□□□□□ -0.65
SEC23A-201ENST00000307712 RASL11AQ6T310 242 aa10.99□□□□□ -0.65
SEC23A-201ENST00000307712 C1orf162Q8NEQ5 155 aaPredicted RBP10.99□□□□□ -0.65
SEC23A-201ENST00000307712 CHCHD1Q96BP2 118 aaKnown RBP10.99□□□□□ -0.65
SEC23A-201ENST00000307712 RPUSD1Q9UJJ7 312 aaKnown RBP10.99□□□□□ -0.65
SEC23A-201ENST00000307712 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
SEC23A-201ENST00000307712 S100A4P26447 101 aaKnown RBP10.99□□□□□ -0.65
SEC23A-201ENST00000307712 FAM27E3Q08E93 113 aa10.99□□□□□ -0.65
SEC23A-201ENST00000307712 SPCS1Q9Y6A9 102 aa10.99□□□□□ -0.65
SEC23A-201ENST00000307712 KIR3DL3Q8N743 410 aa10.99□□□□□ -0.65
SEC23A-201ENST00000307712 TMEM14BQ9NUH8 114 aa10.99□□□□□ -0.65
SEC23A-201ENST00000307712 CHD7Q9P2D1 2997 aa10.99□□□□□ -0.65
SEC23A-201ENST00000307712 IL4P05112 153 aa10.99□□□□□ -0.65
SEC23A-201ENST00000307712 ZFHX2Q9C0A1 2572 aaPredicted RBP10.98□□□□□ -0.65
SEC23A-201ENST00000307712 C15orf65H3BRN8 121 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 J3KRW8 73 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 LGALS7P47929 136 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 FXYD7P58549 80 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 NEUROG1Q92886 237 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 FBXL15Q9H469 300 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 SPAARA0A1B0GVQ0 90 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 GAGE12BA1L429 117 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 TM4SF5O14894 197 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 CACNG7P62955 275 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 PRR20EP86478 221 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 PRR20CP86479 221 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 PRR20DP86480 221 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 PRR20BP86481 221 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 PRR20AP86496 221 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 EXOC3-AS1Q8N2X6 119 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 ASCL2Q99929 193 aa10.98□□□□□ -0.65
SEC23A-201ENST00000307712 C16orf97H3BN30 126 aa10.97□□□□□ -0.65
SEC23A-201ENST00000307712 CEACAM8P31997 349 aaPredicted RBP10.97□□□□□ -0.65
SEC23A-201ENST00000307712 TIMM23BQ5SRD1 257 aa10.97□□□□□ -0.65
SEC23A-201ENST00000307712 SMIM27A0A1W2PRY6 76 aa10.97□□□□□ -0.65
SEC23A-201ENST00000307712 F2RL2O00254 374 aa10.97□□□□□ -0.65
SEC23A-201ENST00000307712 ZNF329Q86UD4 541 aa10.97□□□□□ -0.65
SEC23A-201ENST00000307712 CST9LQ9H4G1 147 aa10.97□□□□□ -0.65
SEC23A-201ENST00000307712 LSM4Q9Y4Z0 139 aaKnown RBP10.97□□□□□ -0.65
SEC23A-201ENST00000307712 LINC00312Q9Y6C7 94 aa10.97□□□□□ -0.65
SEC23A-201ENST00000307712 IGHV2-26A0A0B4J1V2 119 aa10.97□□□□□ -0.65
SEC23A-201ENST00000307712 OR2K2Q8NGT1 345 aa10.97□□□□□ -0.65
SEC23A-201ENST00000307712 TIMD4Q96H15 378 aa10.97□□□□□ -0.65
SEC23A-201ENST00000307712 TMEM30BQ3MIR4 351 aa10.96□□□□□ -0.65
SEC23A-201ENST00000307712 EBLN2Q6P2I7 272 aa10.96□□□□□ -0.65
SEC23A-201ENST00000307712 GFRALQ6UXV0 394 aa10.96□□□□□ -0.65
SEC23A-201ENST00000307712 MALRD1Q5VYJ5 2156 aa10.96□□□□□ -0.65
SEC23A-201ENST00000307712 DAZAP2Q15038 168 aaPredicted RBP10.96□□□□□ -0.65
SEC23A-201ENST00000307712 TEX45Q8NA69 505 aa10.96□□□□□ -0.65
SEC23A-201ENST00000307712 MYOZ3Q8TDC0 251 aa10.96□□□□□ -0.65
SEC23A-201ENST00000307712 MMP23AO75900 390 aa10.96□□□□□ -0.66
SEC23A-201ENST00000307712 TCRAP04437 139 aa10.96□□□□□ -0.66
SEC23A-201ENST00000307712 OCIAD2Q56VL3 154 aa10.96□□□□□ -0.66
SEC23A-201ENST00000307712 DUX4L9Q6RFH8 374 aaPredicted RBP10.96□□□□□ -0.66
SEC23A-201ENST00000307712 SCGB1D4Q6XE38 83 aa10.96□□□□□ -0.66
SEC23A-201ENST00000307712 MAP1LC3AQ9H492 121 aa10.96□□□□□ -0.66
SEC23A-201ENST00000307712 TRAV8-6A0A0B4J262 113 aa10.95□□□□□ -0.66
SEC23A-201ENST00000307712 CGB1A6NKQ9 187 aa10.95□□□□□ -0.66
SEC23A-201ENST00000307712 SMIM13P0DJ93 91 aa10.95□□□□□ -0.66
SEC23A-201ENST00000307712 RBPJQ06330 500 aa10.95□□□□□ -0.66
SEC23A-201ENST00000307712 ITGB1BP1O14713 200 aa10.95□□□□□ -0.66
SEC23A-201ENST00000307712 GUSBP1Q15486 140 aa10.95□□□□□ -0.66
SEC23A-201ENST00000307712 MS4A6AQ9H2W1 248 aa10.95□□□□□ -0.66
SEC23A-201ENST00000307712 IGHV3OR16-8A0A075B7F1 116 aa10.95□□□□□ -0.66
SEC23A-201ENST00000307712 KLK10O43240 276 aa10.95□□□□□ -0.66
SEC23A-201ENST00000307712 SCGB1C2P0DMR2 95 aa10.95□□□□□ -0.66
SEC23A-201ENST00000307712 C11orf53Q8IXP5 236 aa10.95□□□□□ -0.66
SEC23A-201ENST00000307712 ORMDL3Q8N138 153 aa10.95□□□□□ -0.66
SEC23A-201ENST00000307712 TMPRSS3P57727 454 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms