RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 PRSS3P2Q8NHM4 247 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 GTSF1Q8WW33 167 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 PGLYRP4Q96LB8 373 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 TM2D2Q9BX73 214 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 IGKV1OR2-108A0A075B7D4 117 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 KBTBD11-OT1A0A1B0GTJ5 212 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 IGHV3-9P01782 118 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 SAA2P0DJI9 122 aaPredicted RBP4.35□□□□□ -1.71
USP8-201ENST00000307179 ZXDAP98168 799 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 LYRM7Q5U5X0 104 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 ABHD17BQ5VST6 288 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 LINC00173Q6ZV60 143 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 CIARTQ8N365 385 aaPredicted RBP4.35□□□□□ -1.71
USP8-201ENST00000307179 TTC9CQ8N5M4 171 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 TMEM167AQ8TBQ9 72 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 CT55Q8WUE5 264 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 ITLN1Q8WWA0 313 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 ZNF414Q96IQ9 312 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 SLC25A39Q9BZJ4 359 aaPredicted RBP4.35□□□□□ -1.71
USP8-201ENST00000307179 SSUH2Q9Y2M2 353 aa4.35□□□□□ -1.71
USP8-201ENST00000307179 MOSP00540 346 aa4.34□□□□□ -1.71
USP8-201ENST00000307179 CEBPDP49716 269 aaPredicted RBP4.34□□□□□ -1.71
USP8-201ENST00000307179 FABP6P51161 128 aa4.34□□□□□ -1.71
USP8-201ENST00000307179 CCL11P51671 97 aa4.34□□□□□ -1.71
USP8-201ENST00000307179 RPL39P5Q59GN2 51 aa4.34□□□□□ -1.71
USP8-201ENST00000307179 DHRS13Q6UX07 377 aa4.34□□□□□ -1.71
USP8-201ENST00000307179 CD177Q8N6Q3 437 aa4.34□□□□□ -1.71
USP8-201ENST00000307179 KLF14Q8TD94 323 aaPredicted RBP4.34□□□□□ -1.71
USP8-201ENST00000307179 MRPL16Q9NX20 251 aaKnown RBP4.34□□□□□ -1.71
USP8-201ENST00000307179 COL8A1P27658 744 aa4.34□□□□□ -1.71
USP8-201ENST00000307179 C3orf36Q3SXR2 165 aa4.34□□□□□ -1.71
USP8-201ENST00000307179 Q6ZR03 302 aa4.34□□□□□ -1.71
USP8-201ENST00000307179 ZNF833PQ6ZTB9 187 aa4.34□□□□□ -1.71
USP8-201ENST00000307179 ARPC1AQ92747 370 aa4.34□□□□□ -1.71
USP8-201ENST00000307179 SPANXB1Q9NS25 103 aaPredicted RBP4.34□□□□□ -1.71
USP8-201ENST00000307179 KLF13Q9Y2Y9 288 aaPredicted RBP4.34□□□□□ -1.71
USP8-201ENST00000307179 PGPA6NDG6 321 aa4.34□□□□□ -1.72
USP8-201ENST00000307179 A6NJY4 79 aa4.34□□□□□ -1.72
USP8-201ENST00000307179 SH2D7A6NKC9 451 aaPredicted RBP4.34□□□□□ -1.72
USP8-201ENST00000307179 VWC2LB2RUY7 222 aa4.34□□□□□ -1.72
USP8-201ENST00000307179 E9PLD3 99 aa4.34□□□□□ -1.72
USP8-201ENST00000307179 NTN3O00634 580 aaPredicted RBP4.34□□□□□ -1.72
USP8-201ENST00000307179 TIMM8AO60220 97 aaPredicted RBP4.34□□□□□ -1.72
USP8-201ENST00000307179 ATP5LO75964 103 aa4.34□□□□□ -1.72
USP8-201ENST00000307179 CRYGCP07315 174 aa4.34□□□□□ -1.72
USP8-201ENST00000307179 GP9P14770 177 aa4.34□□□□□ -1.72
USP8-201ENST00000307179 EVI2AP22794 236 aa4.34□□□□□ -1.72
USP8-201ENST00000307179 RND1Q92730 232 aa4.34□□□□□ -1.72
USP8-201ENST00000307179 ZMAT4Q9H898 229 aa4.34□□□□□ -1.72
USP8-201ENST00000307179 DSCAML1Q8TD84 2053 aa4.34□□□□□ -1.72
USP8-201ENST00000307179 VPS13AQ96RL7 3174 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 A0A1W2PRD5 423 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 A0A1W2PRF3 423 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 A0A1W2PRM7 423 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 DEFB108AA8MXU0 73 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 OR11H12B2RN74 326 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 TCTAP57738 103 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 CKS1BP61024 79 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 PLGLAQ15195 96 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 COX8CQ7Z4L0 72 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 ORMDL3Q8N138 153 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 OR11H1Q8NG94 326 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 OR11H2Q8NH07 326 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 SAP25Q8TEE9 199 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 RITA1Q96K30 269 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 THYN1Q9P016 225 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 GNG7O60262 68 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 IGKV3-15P01624 115 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 VEGFBP49765 207 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 C5orf64Q2M2E5 130 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 LINC00305Q7Z4B0 112 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 VKORC1L1Q8N0U8 176 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 TTTY12Q9BZ98 90 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 TEX48A0A1B0GUV7 120 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 WNT9BO14905 357 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 UQCRFS1P47985 274 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 RPL24P83731 157 aaKnown RBP4.33□□□□□ -1.72
USP8-201ENST00000307179 KLRD1Q13241 179 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 DEFB119Q8N690 84 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 ZNF418Q8TF45 676 aaPredicted RBP4.33□□□□□ -1.72
USP8-201ENST00000307179 IFI27L1Q96BM0 104 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 Q9H3A6 140 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 CYSLTR1Q9Y271 337 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 F5P12259 2224 aa4.33□□□□□ -1.72
USP8-201ENST00000307179 PINLYPA6NC86 204 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 SLC25A17O43808 307 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 PYYP10082 97 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 CD46P15529 392 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 GATA4P43694 442 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 FOXG1P55316 489 aaPredicted RBP4.32□□□□□ -1.72
USP8-201ENST00000307179 C17orf58Q2M2W7 97 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 PATE2Q6UY27 113 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 PILRBQ9UKJ0 227 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 R4GN57 208 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 RAI1Q7Z5J4 1906 aaPredicted RBP4.32□□□□□ -1.72
USP8-201ENST00000307179 ZNF407Q9C0G0 2248 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 IGKV1D-17A0A075B6S4 117 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 KLRC4-KLRK1H3BQV0 150 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 SAA1P0DJI8 122 aaPredicted RBP4.32□□□□□ -1.72
USP8-201ENST00000307179 S100A7P31151 101 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms