RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 RABAC1Q9UI14 185 aa8.3□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 IGHV3OR16-13A0A075B7E8 117 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 IGHV3-74A0A0B4J1X5 117 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 FAM24AA6NFZ4 105 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 PMS2P5A8MQ11 134 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 CFDP00746 253 aaPredicted RBP8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 S100A7P31151 101 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 EIF2B2P49770 351 aaKnown RBP8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 H2BFSP57053 126 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 LYZP61626 148 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 PAFAH1B2P68402 229 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 SLC38A11Q08AI6 406 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 IL15RAQ13261 267 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 TMEM144Q7Z5S9 345 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 BPIFCQ8NFQ6 507 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 PPP1R1CQ8WVI7 109 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 ST8SIA2Q92186 375 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 PPP1R14BQ96C90 147 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 RNF125Q96EQ8 232 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 ZNF414Q96IQ9 312 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 RNF2Q99496 336 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 SPAG8Q99932 426 aaPredicted RBP8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 GGACTQ9BVM4 153 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 SLC25A31Q9H0C2 315 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 NPVFQ9HCQ7 196 aa8.29□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 NOTCH1P46531 2555 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 IGKV3-7A0A075B6H7 116 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 IGKV1D-37A0A075B6S9 117 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 IGHV3-66A0A0C4DH42 116 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 OR4C46A6NHA9 309 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 TSPAN4O14817 238 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 CST7O76096 145 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 CRYBB3P26998 211 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 P2RY1P47900 373 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 SULT1A1P50225 295 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 RPL11P62913 178 aaKnown RBP8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 ZNF90Q03938 601 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 OR2F1Q13607 317 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 OXA1LQ15070 435 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 USF2Q15853 346 aaPredicted RBP8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 TEPPQ6URK8 271 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 TCF24Q7RTU0 167 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 TMEM252Q8N6L7 170 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 TMEM217Q8N7C4 229 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 NEURL2Q9BR09 285 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 C11orf1Q9H5F2 150 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 VSIRQ9H7M9 311 aa8.28□□□□□ -1.08
CSPG4P1Y-201ENST00000306641 IGKV1OR2-108A0A075B7D4 117 aa8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 IGSF23A1L1A6 192 aa8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 ZNF785A8K8V0 405 aa8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 APOHP02749 345 aaPredicted RBP8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 S100A11P31949 105 aa8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 SELENOTP62341 195 aa8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 RAB31Q13636 194 aa8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 CYP2G1PQ6ZSU1 146 aa8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 TMEM147Q9BVK8 224 aa8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 TUBA4BQ9H853 241 aa8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 UQCC1Q9NVA1 299 aa8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 OR5AC2Q9NZP5 309 aa8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 LSM4Q9Y4Z0 139 aaKnown RBP8.27□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 UBE2L5PA0A1B0GUS4 154 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 HELTA6NFD8 242 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 DNASE2O00115 360 aaPredicted RBP8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 MPC2O95563 127 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 CD7P09564 240 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 TFPI2P48307 235 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 BAXQ07812 192 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 ARL16Q0P5N6 197 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 FCN2Q15485 313 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 ATP6V1FQ16864 119 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 S100A7AQ86SG5 101 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 ZNF546Q86UE3 836 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 OR1B1Q8NGR6 318 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 THAP6Q8TBB0 222 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 ASB13Q8WXK3 278 aa8.26□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 OR11H12B2RN74 326 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 DFFBO76075 338 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 LINC00869P0C866 280 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 IGHV4-30-4P0DP06 118 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 ORM2P19652 201 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 CXCL3P19876 107 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 AP2S1P53680 142 aaPredicted RBP8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 RAP2BP61225 183 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 EWSR1Q01844 656 aaKnown RBP eCLIP8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 FGL1Q08830 312 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 GBGT1Q8N5D6 347 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 STXBP6Q8NFX7 210 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 B9D2Q9BPU9 175 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 MBD2Q9UBB5 411 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 FBXL17Q9UF56 701 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 SLC45A2Q9UMX9 530 aa8.25□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 H0YIZ8 118 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 GIPP09681 153 aaPredicted RBP8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 GATA2P23769 480 aaPredicted RBP8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 CMC4P56277 68 aaPredicted RBP8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 FAM90A2PQ658T7 463 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 C16orf54Q6UWD8 224 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 SIGLEC15Q6ZMC9 328 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 WFDC3Q8IUB2 231 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 Q8N1Y9 231 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms