RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 APCSP02743 223 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 PMCHP20382 165 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 GAGE1Q13065 139 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 MRGPRG-AS1Q2M3A8 158 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 ZNF329Q86UD4 541 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 OR1B1Q8NGR6 318 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 MBD6Q96DN6 1003 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 ARHGAP32A7KAX9 2087 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 TNFRSF13BO14836 293 aaPredicted RBP12.15□□□□□ -0.46
CSDC2-201ENST00000306149 MFAP2P55001 183 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 LEMD1Q68G75 181 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 Q8NA96 180 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 FXYD5Q96DB9 178 aa12.15□□□□□ -0.46
CSDC2-201ENST00000306149 E7EQL1 145 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 SUB1P53999 127 aaKnown RBP eCLIP12.14□□□□□ -0.47
CSDC2-201ENST00000306149 DLX6P56179 175 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 FAM19A2Q8N3H0 131 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 OR1L4Q8NGR5 311 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 OR4A5Q8NH83 315 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 TMEM208Q9BTX3 173 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 MRPL27Q9P0M9 148 aaKnown RBP12.14□□□□□ -0.47
CSDC2-201ENST00000306149 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 CORTO00230 105 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 PEX7O00628 323 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 DLEU1O43261 78 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 FSTL3O95633 263 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 IGHV1-8P0DP01 117 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 SLAQ13239 276 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 TNXAQ16473 311 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 NIT1Q86X76 327 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 C11orf42Q8N5U0 333 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 PRSS33Q8NF86 280 aa12.14□□□□□ -0.47
CSDC2-201ENST00000306149 ZNF331Q9NQX6 463 aaPredicted RBP12.14□□□□□ -0.47
CSDC2-201ENST00000306149 ANKHD1Q8IWZ3 2542 aaKnown RBP12.14□□□□□ -0.47
CSDC2-201ENST00000306149 TCF15Q12870 199 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 VMA21Q3ZAQ7 101 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 TSKUQ8WUA8 353 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 LPAR2Q9HBW0 351 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 TNFRSF19Q9NS68 423 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 A6NNC1 897 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 PRB4P10163 310 aaPredicted RBP12.13□□□□□ -0.47
CSDC2-201ENST00000306149 TMEM155Q4W5P6 130 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 SPATA45Q537H7 98 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 ZNF841Q6ZN19 808 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 NUDT10Q8NFP7 164 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 NUDT11Q96G61 164 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 PTPRQQ9UMZ3 2332 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 MED13LQ71F56 2210 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 IGLC7A0M8Q6 106 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 PRRX1P54821 245 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 THAP8Q8NA92 274 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 C18orf32Q8TCD1 76 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 GRAMD2BQ96HH9 432 aa12.13□□□□□ -0.47
CSDC2-201ENST00000306149 ASH1LQ9NR48 2969 aaKnown RBP12.12□□□□□ -0.47
CSDC2-201ENST00000306149 SHISA9B4DS77 424 aa12.12□□□□□ -0.47
CSDC2-201ENST00000306149 C3orf79P0CE67 100 aa12.12□□□□□ -0.47
CSDC2-201ENST00000306149 FAM71F2Q6NXP2 309 aa12.12□□□□□ -0.47
CSDC2-201ENST00000306149 LINC00311Q8N616 119 aa12.12□□□□□ -0.47
CSDC2-201ENST00000306149 SSBP4Q9BWG4 385 aaPredicted RBP12.12□□□□□ -0.47
CSDC2-201ENST00000306149 PGPA6NDG6 321 aa12.12□□□□□ -0.47
CSDC2-201ENST00000306149 GPR6P46095 362 aaPredicted RBP12.12□□□□□ -0.47
CSDC2-201ENST00000306149 GDF5OSQ5U4N7 250 aa12.12□□□□□ -0.47
CSDC2-201ENST00000306149 SLC25A5P05141 298 aaKnown RBP12.11□□□□□ -0.47
CSDC2-201ENST00000306149 FAM87AP0C7U9 286 aa12.11□□□□□ -0.47
CSDC2-201ENST00000306149 NTF3P20783 257 aa12.11□□□□□ -0.47
CSDC2-201ENST00000306149 CAMPP49913 170 aa12.11□□□□□ -0.47
CSDC2-201ENST00000306149 NUP35Q8NFH5 326 aa12.11□□□□□ -0.47
CSDC2-201ENST00000306149 CHRDL1Q9BU40 450 aa12.11□□□□□ -0.47
CSDC2-201ENST00000306149 TMEM133Q9H2Q1 129 aa12.11□□□□□ -0.47
CSDC2-201ENST00000306149 IGHV1-69-2A0A0G2JMI3 117 aa12.11□□□□□ -0.47
CSDC2-201ENST00000306149 ATRXP46100 2492 aa12.11□□□□□ -0.47
CSDC2-201ENST00000306149 TBR1Q16650 682 aa12.11□□□□□ -0.47
CSDC2-201ENST00000306149 ZNF596Q8TC21 504 aa12.11□□□□□ -0.47
CSDC2-201ENST00000306149 IGFBPL1Q8WX77 278 aa12.11□□□□□ -0.47
CSDC2-201ENST00000306149 UQCR10Q9UDW1 63 aa12.11□□□□□ -0.47
CSDC2-201ENST00000306149 TMEM238LA0A1B0GVL6 79 aa12.1□□□□□ -0.47
CSDC2-201ENST00000306149 MC5RP33032 325 aa12.1□□□□□ -0.47
CSDC2-201ENST00000306149 MYCNOSP40205 109 aa12.1□□□□□ -0.47
CSDC2-201ENST00000306149 C7orf69Q9H7B7 122 aa12.1□□□□□ -0.47
CSDC2-201ENST00000306149 JKAMPQ9P055 326 aa12.1□□□□□ -0.47
CSDC2-201ENST00000306149 GOLT1BQ9Y3E0 138 aa12.1□□□□□ -0.47
CSDC2-201ENST00000306149 VWC2LB2RUY7 222 aa12.1□□□□□ -0.47
CSDC2-201ENST00000306149 COX7A1P24310 79 aa12.1□□□□□ -0.47
CSDC2-201ENST00000306149 RPL27AP46776 148 aaKnown RBP12.1□□□□□ -0.47
CSDC2-201ENST00000306149 KLF5Q13887 457 aaPredicted RBP12.1□□□□□ -0.47
CSDC2-201ENST00000306149 COL5A1-AS1Q5SY13 56 aa12.1□□□□□ -0.47
CSDC2-201ENST00000306149 SPACA3Q8IXA5 215 aa12.1□□□□□ -0.47
CSDC2-201ENST00000306149 BORCS7Q96B45 105 aa12.1□□□□□ -0.47
CSDC2-201ENST00000306149 VSTM5A8MXK1 200 aa12.09□□□□□ -0.47
CSDC2-201ENST00000306149 TOX4O94842 621 aa12.09□□□□□ -0.47
CSDC2-201ENST00000306149 NPSP0C0P6 89 aa12.09□□□□□ -0.47
CSDC2-201ENST00000306149 IGLC2P0DOY2 106 aa12.09□□□□□ -0.47
CSDC2-201ENST00000306149 IGLC3P0DOY3 106 aa12.09□□□□□ -0.47
CSDC2-201ENST00000306149 UBE2G1P62253 170 aa12.09□□□□□ -0.47
CSDC2-201ENST00000306149 C8orf31Q8N9H6 132 aa12.09□□□□□ -0.47
CSDC2-201ENST00000306149 SMIM12Q96EX1 92 aa12.09□□□□□ -0.47
CSDC2-201ENST00000306149 EPDR1Q9UM22 224 aa12.09□□□□□ -0.47
CSDC2-201ENST00000306149 IGHV2-26A0A0B4J1V2 119 aa12.09□□□□□ -0.47
CSDC2-201ENST00000306149 HIGD1CA8MV81 97 aa12.09□□□□□ -0.47
CSDC2-201ENST00000306149 OR2J3O76001 311 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms