RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 GP9P14770 177 aa15.31■□□□□ 0.04
HOXC4-201ENST00000303406 GNG4P50150 75 aa15.31■□□□□ 0.04
HOXC4-201ENST00000303406 FAM120AOSQ5T036 256 aa15.31■□□□□ 0.04
HOXC4-201ENST00000303406 S100A7AQ86SG5 101 aa15.31■□□□□ 0.04
HOXC4-201ENST00000303406 ZNF329Q86UD4 541 aa15.31■□□□□ 0.04
HOXC4-201ENST00000303406 OR5T1Q8NG75 326 aa15.31■□□□□ 0.04
HOXC4-201ENST00000303406 IGHV1-69DA0A0B4J2H0 117 aa15.3■□□□□ 0.04
HOXC4-201ENST00000303406 PGPEP1LA6NFU8 196 aa15.3■□□□□ 0.04
HOXC4-201ENST00000303406 IGHV1-69P01742 117 aa15.3■□□□□ 0.04
HOXC4-201ENST00000303406 FAM3BP58499 235 aaPredicted RBP15.3■□□□□ 0.04
HOXC4-201ENST00000303406 CENPWQ5EE01 88 aa15.3■□□□□ 0.04
HOXC4-201ENST00000303406 SGMS2Q8NHU3 365 aa15.3■□□□□ 0.04
HOXC4-201ENST00000303406 FAM110DQ8TAY7 271 aaPredicted RBP15.3■□□□□ 0.04
HOXC4-201ENST00000303406 IGF2BP2-AS1Q96M15 143 aa15.3■□□□□ 0.04
HOXC4-201ENST00000303406 TXN2Q99757 166 aa15.3■□□□□ 0.04
HOXC4-201ENST00000303406 CDC42EP3Q9UKI2 254 aa15.3■□□□□ 0.04
HOXC4-201ENST00000303406 DCHS2Q6V1P9 2916 aa15.3■□□□□ 0.04
HOXC4-201ENST00000303406 DOPEY1Q5JWR5 2465 aa15.29■□□□□ 0.04
HOXC4-201ENST00000303406 PPP5D1E7EU14 171 aa15.29■□□□□ 0.04
HOXC4-201ENST00000303406 PHOX2AO14813 284 aa15.29■□□□□ 0.04
HOXC4-201ENST00000303406 SCGB2A1O75556 95 aa15.29■□□□□ 0.04
HOXC4-201ENST00000303406 TRGC2P03986 189 aa15.29■□□□□ 0.04
HOXC4-201ENST00000303406 LYZP61626 148 aa15.29■□□□□ 0.04
HOXC4-201ENST00000303406 NECAP1Q8NC96 275 aa15.29■□□□□ 0.04
HOXC4-201ENST00000303406 SLC25A39Q9BZJ4 359 aaPredicted RBP15.29■□□□□ 0.04
HOXC4-201ENST00000303406 MEGF9Q9H1U4 602 aa15.29■□□□□ 0.04
HOXC4-201ENST00000303406 GSX1Q9H4S2 264 aaPredicted RBP15.29■□□□□ 0.04
HOXC4-201ENST00000303406 IGHV4-30-2A0A087WSY4 118 aa15.28■□□□□ 0.04
HOXC4-201ENST00000303406 WI2-2373I1.2A0A1W2PRP0 233 aa15.28■□□□□ 0.04
HOXC4-201ENST00000303406 K7EN84 100 aa15.28■□□□□ 0.04
HOXC4-201ENST00000303406 GCGP01275 180 aa15.28■□□□□ 0.04
HOXC4-201ENST00000303406 PRB1P04280 392 aa15.28■□□□□ 0.04
HOXC4-201ENST00000303406 NBEAP1P0C6P0 100 aa15.28■□□□□ 0.04
HOXC4-201ENST00000303406 CNN1P51911 297 aaKnown RBP15.28■□□□□ 0.04
HOXC4-201ENST00000303406 RNF24Q9Y225 148 aa15.28■□□□□ 0.04
HOXC4-201ENST00000303406 ACACBO00763 2458 aa15.28■□□□□ 0.04
HOXC4-201ENST00000303406 IGSF10Q6WRI0 2623 aa15.28■□□□□ 0.04
HOXC4-201ENST00000303406 PEX7O00628 323 aa15.27■□□□□ 0.04
HOXC4-201ENST00000303406 GNG7O60262 68 aa15.27■□□□□ 0.04
HOXC4-201ENST00000303406 COX6B1P14854 86 aa15.27■□□□□ 0.04
HOXC4-201ENST00000303406 SLC25A16P16260 332 aa15.27■□□□□ 0.04
HOXC4-201ENST00000303406 VN1R17PQ8TDU5 208 aa15.27■□□□□ 0.04
HOXC4-201ENST00000303406 OSTCQ9NRP0 149 aa15.27■□□□□ 0.04
HOXC4-201ENST00000303406 AURKAIP1Q9NWT8 199 aaPredicted RBP15.27■□□□□ 0.04
HOXC4-201ENST00000303406 C21orf62Q9NYP8 219 aa15.27■□□□□ 0.04
HOXC4-201ENST00000303406 A0A1W2PPQ1 181 aa15.27■□□□□ 0.03
HOXC4-201ENST00000303406 H3BRN7 92 aa15.27■□□□□ 0.03
HOXC4-201ENST00000303406 S100A9P06702 114 aaKnown RBP15.27■□□□□ 0.03
HOXC4-201ENST00000303406 FABP9Q0Z7S8 132 aa15.27■□□□□ 0.03
HOXC4-201ENST00000303406 ZNF491Q8N8L2 437 aa15.27■□□□□ 0.03
HOXC4-201ENST00000303406 SMIM12Q96EX1 92 aa15.27■□□□□ 0.03
HOXC4-201ENST00000303406 SHANK2-AS3Q9BTD1 123 aa15.27■□□□□ 0.03
HOXC4-201ENST00000303406 IL36BQ9NZH7 164 aa15.27■□□□□ 0.03
HOXC4-201ENST00000303406 HIST1H2BKO60814 126 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 IGLV2-8P01709 118 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 S100A8P05109 93 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 HIST1H2BJP06899 126 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 HIST1H1EP10412 219 aaKnown RBP15.26■□□□□ 0.03
HOXC4-201ENST00000303406 HIST1H2BOP23527 126 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 HIST1H2BBP33778 126 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 HIST1H2BDP58876 126 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 HIST1H2BCP62807 126 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 HIST2H2BEQ16778 126 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 KLF17Q5JT82 389 aaPredicted RBP15.26■□□□□ 0.03
HOXC4-201ENST00000303406 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.26■□□□□ 0.03
HOXC4-201ENST00000303406 LINC00518Q8N0U6 118 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 HIST1H2BHQ93079 126 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 RNF125Q96EQ8 232 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 HIST1H2BNQ99877 126 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 HIST1H2BMQ99879 126 aa15.26■□□□□ 0.03
HOXC4-201ENST00000303406 F8W735 103 aaPredicted RBP15.25■□□□□ 0.03
HOXC4-201ENST00000303406 ISLRO14498 428 aa15.25■□□□□ 0.03
HOXC4-201ENST00000303406 MSMBP08118 114 aa15.25■□□□□ 0.03
HOXC4-201ENST00000303406 HOXA5P20719 270 aa15.25■□□□□ 0.03
HOXC4-201ENST00000303406 GATA3P23771 443 aa15.25■□□□□ 0.03
HOXC4-201ENST00000303406 C5orf56Q8N8D9 126 aa15.25■□□□□ 0.03
HOXC4-201ENST00000303406 C5orf17Q8NAS9 161 aa15.25■□□□□ 0.03
HOXC4-201ENST00000303406 HSPB9Q9BQS6 159 aa15.25■□□□□ 0.03
HOXC4-201ENST00000303406 EPDR1Q9UM22 224 aa15.25■□□□□ 0.03
HOXC4-201ENST00000303406 MOB4Q9Y3A3 225 aa15.25■□□□□ 0.03
HOXC4-201ENST00000303406 NDUFB8O95169 186 aa15.24■□□□□ 0.03
HOXC4-201ENST00000303406 TRGC1P0CF51 173 aa15.24■□□□□ 0.03
HOXC4-201ENST00000303406 AKR1D1P51857 326 aa15.24■□□□□ 0.03
HOXC4-201ENST00000303406 CRIP2P52943 208 aaPredicted RBP15.24■□□□□ 0.03
HOXC4-201ENST00000303406 TMEM183BQ1AE95 376 aa15.24■□□□□ 0.03
HOXC4-201ENST00000303406 ZNF600Q6ZNG1 722 aa15.24■□□□□ 0.03
HOXC4-201ENST00000303406 FRZBQ92765 325 aa15.24■□□□□ 0.03
HOXC4-201ENST00000303406 OTORQ9NRC9 128 aa15.24■□□□□ 0.03
HOXC4-201ENST00000303406 KLF12Q9Y4X4 402 aa15.24■□□□□ 0.03
HOXC4-201ENST00000303406 CFAP46Q8IYW2 2715 aa15.24■□□□□ 0.03
HOXC4-201ENST00000303406 B4DSR2 109 aa15.23■□□□□ 0.03
HOXC4-201ENST00000303406 Q56UQ5 140 aa15.23■□□□□ 0.03
HOXC4-201ENST00000303406 V9GYV3 84 aa15.23■□□□□ 0.03
HOXC4-201ENST00000303406 TRAV20A0A0B4J274 112 aa15.22■□□□□ 0.03
HOXC4-201ENST00000303406 TRAV40A0A0B4J280 105 aa15.22■□□□□ 0.03
HOXC4-201ENST00000303406 PGPA6NDG6 321 aa15.22■□□□□ 0.03
HOXC4-201ENST00000303406 OR2J3O76001 311 aa15.22■□□□□ 0.03
HOXC4-201ENST00000303406 HNF1AP20823 631 aa15.22■□□□□ 0.03
HOXC4-201ENST00000303406 S100A7P31151 101 aa15.22■□□□□ 0.03
HOXC4-201ENST00000303406 ERVFC1-1P60608 527 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms