RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 CXXC4Q9H2H0 198 aa8.9□□□□□ -0.98
SNX20-201ENST00000300590 RPP21Q9H633 154 aaKnown RBP8.9□□□□□ -0.98
SNX20-201ENST00000300590 HSPB8Q9UJY1 196 aa8.9□□□□□ -0.98
SNX20-201ENST00000300590 FAM90A9PA6NNJ1 464 aa8.9□□□□□ -0.98
SNX20-201ENST00000300590 IQCF6A8MYZ5 107 aa8.9□□□□□ -0.98
SNX20-201ENST00000300590 COX8AP10176 69 aa8.9□□□□□ -0.98
SNX20-201ENST00000300590 ACP1P24666 158 aa8.9□□□□□ -0.98
SNX20-201ENST00000300590 FAM162BQ5T6X4 162 aa8.9□□□□□ -0.98
SNX20-201ENST00000300590 PET117Q6UWS5 81 aa8.9□□□□□ -0.98
SNX20-201ENST00000300590 PDPNQ86YL7 162 aa8.9□□□□□ -0.98
SNX20-201ENST00000300590 CNEP1R1Q8N9A8 125 aa8.9□□□□□ -0.98
SNX20-201ENST00000300590 CHCHD1Q96BP2 118 aaKnown RBP8.9□□□□□ -0.98
SNX20-201ENST00000300590 GUCD1Q96NT3 240 aa8.9□□□□□ -0.98
SNX20-201ENST00000300590 JKAMPQ9P055 326 aa8.9□□□□□ -0.98
SNX20-201ENST00000300590 FOXA2Q9Y261 457 aaPredicted RBP8.9□□□□□ -0.98
SNX20-201ENST00000300590 A0A1B0GXF2 115 aa8.9□□□□□ -0.99
SNX20-201ENST00000300590 TNFSF15O95150 251 aa8.9□□□□□ -0.99
SNX20-201ENST00000300590 COL8A1P27658 744 aa8.9□□□□□ -0.99
SNX20-201ENST00000300590 NMUP48645 174 aa8.9□□□□□ -0.99
SNX20-201ENST00000300590 FAM231DQ6ZW35 169 aa8.9□□□□□ -0.99
SNX20-201ENST00000300590 LINC00305Q7Z4B0 112 aa8.9□□□□□ -0.99
SNX20-201ENST00000300590 CALYQ9NYX4 217 aa8.9□□□□□ -0.99
SNX20-201ENST00000300590 JPT1Q9UK76 154 aa8.9□□□□□ -0.99
SNX20-201ENST00000300590 LOC400499M0QZD8 3231 aa8.9□□□□□ -0.99
SNX20-201ENST00000300590 IGKV1D-17A0A075B6S4 117 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 TEX50A0A1B0GTY4 177 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 K7EQM0 130 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 FAM106CPP0CH98 169 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 REG1BP48304 166 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 CRYBA4P53673 196 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 LOXL3P58215 753 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 FAM106AQ4KMX7 169 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 C10orf55Q5SWW7 151 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 DUX4L9Q6RFH8 374 aaPredicted RBP8.89□□□□□ -0.99
SNX20-201ENST00000300590 AP5S1Q9NUS5 200 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 TNRC6BQ9UPQ9 1833 aaKnown RBP8.89□□□□□ -0.99
SNX20-201ENST00000300590 A6NDN8 102 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 C9orf118A6NHY6 69 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 PATE3B3GLJ2 98 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 PATE2Q6UY27 113 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 FA2HQ7L5A8 372 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 CIARTQ8N365 385 aaPredicted RBP8.89□□□□□ -0.99
SNX20-201ENST00000300590 EPDR1Q9UM22 224 aa8.89□□□□□ -0.99
SNX20-201ENST00000300590 TSSC4Q9Y5U2 329 aaPredicted RBP8.89□□□□□ -0.99
SNX20-201ENST00000300590 CFAP47Q6ZTR5 3102 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 TEX48A0A1B0GUV7 120 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 K7EMI3 77 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 CD69Q07108 199 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 CFAP161Q6P656 301 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 GPR82Q96P67 336 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 MS4A6AQ9H2W1 248 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 PTPRBP23467 1997 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 CEP192Q8TEP8 1941 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 NCOR1O75376 2440 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 PLCE1Q9P212 2302 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 SERTM2A0A1B0GWG4 89 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 E7EUB6 86 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 FAM90A1Q86YD7 464 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 PRNDQ9UKY0 176 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 ZDBF2Q9HCK1 2354 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 RNASE2P10153 161 aaKnown RBP8.88□□□□□ -0.99
SNX20-201ENST00000300590 IGHV1-2P23083 117 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 MC5RP33032 325 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 SEC11AP67812 179 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 PRCDQ00LT1 54 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 SPRNQ5BIV9 151 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 ATP5L2Q7Z4Y8 100 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 DDB2Q92466 427 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 ZNF257Q9Y2Q1 563 aa8.88□□□□□ -0.99
SNX20-201ENST00000300590 GPR179Q6PRD1 2367 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 TMEM265A0A087WTH1 108 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 hADV38S2A0JD32 116 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 K7EP34 96 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 SP9P0CG40 484 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 HSD52Q0P140 79 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 UFSP1Q6NVU6 142 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 DHRS13Q6UX07 377 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 NEU4Q8WWR8 484 aaPredicted RBP8.87□□□□□ -0.99
SNX20-201ENST00000300590 ADTRPQ96IZ2 230 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 LOXL1Q08397 574 aaPredicted RBP8.87□□□□□ -0.99
SNX20-201ENST00000300590 PEAR1Q5VY43 1037 aaPredicted RBP8.87□□□□□ -0.99
SNX20-201ENST00000300590 RBPMS2Q6ZRY4 209 aaKnown RBP8.87□□□□□ -0.99
SNX20-201ENST00000300590 PRNTQ86SH4 94 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 FXYD5Q96DB9 178 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 MRPL36Q9P0J6 103 aaKnown RBP8.87□□□□□ -0.99
SNX20-201ENST00000300590 POLEQ07864 2286 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 UPK2O00526 184 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 MGST3O14880 152 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 SAA1P0DJI8 122 aaPredicted RBP8.87□□□□□ -0.99
SNX20-201ENST00000300590 APOBEC3AP31941 199 aaPredicted RBP8.87□□□□□ -0.99
SNX20-201ENST00000300590 KIR2DS2P43631 304 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 CACNG7P62955 275 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 PCP2Q8IVA1 136 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 PRR7Q8TB68 274 aa8.87□□□□□ -0.99
SNX20-201ENST00000300590 SPAARA0A1B0GVQ0 90 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 A1L4Q6 167 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 J3QR89 54 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 FABP2P12104 132 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 GCSHP23434 173 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 ERHP84090 104 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms