RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 NDUFA11Q86Y39 141 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 STX12Q86Y82 276 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 C9orf62Q8N4C0 152 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 COMMD1Q8N668 190 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 OR11H1Q8NG94 326 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 OR1S2Q8NGQ3 325 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 OR1N2Q8NGR9 330 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 RNASEH2CQ8TDP1 164 aaKnown RBP4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 HYLS1Q96M11 299 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 AQP10Q96PS8 301 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 RSG1Q9BU20 258 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 GON7Q9BXV9 100 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 SH3BGRL3Q9H299 93 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 KLK9Q9UKQ9 250 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 PKD1L1Q8TDX9 2849 aa4.96□□□□□ -1.62
DEPDC4-201ENST00000299185 RPS10-NUDT3A0A1W2PQS6 291 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 ZFP92A6NM28 416 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 HMSDA8MTL9 139 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 LINC01619G3V211 115 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 CCL24O00175 119 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 CLN5O75503 358 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 CTSGP08311 255 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 PET100P0DJ07 73 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 CDX1P47902 265 aaPredicted RBP4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 MFAP4P55083 255 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 ELLP55199 621 aaPredicted RBP4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 LYZP61626 148 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 FHL3Q13643 280 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 SPATA31B1PQ5VZV4 182 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 BTNL8Q6UX41 500 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 ZNF546Q86UE3 836 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 NOXA1Q86UR1 476 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 STPG3Q8N7X2 389 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 HSD17B11Q8NBQ5 300 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 OR10P1Q8NGE3 313 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 OR4X1Q8NH49 305 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 VN1R17PQ8TDU5 208 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 DLX4Q92988 240 aaPredicted RBP4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 USMG5Q96IX5 58 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 UBE2E2Q96LR5 201 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 ATP5SQ99766 215 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 C20orf24Q9BUV8 137 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 PBDC1Q9BVG4 233 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 GGTLC1Q9BX51 225 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 MFFQ9GZY8 342 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 CYTL1Q9NRR1 136 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 ZFP57Q9NU63 452 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 UQCC1Q9NVA1 299 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 PEF1Q9UBV8 284 aaKnown RBP4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 PLA2G2DQ9UNK4 145 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 WDR83OSQ9Y284 106 aa4.95□□□□□ -1.62
DEPDC4-201ENST00000299185 A0A0G2JLM5 398 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 TMEM213A2RRL7 107 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 CORTO00230 105 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 BCL2L11O43521 198 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 YIF1AO95070 293 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 BRI3O95415 125 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 APOHP02749 345 aaPredicted RBP4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 RPL11P62913 178 aaKnown RBP4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 RPP30P78346 268 aaKnown RBP4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 ZNF616Q08AN1 781 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 OPCMLQ14982 345 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 USF2Q15853 346 aaPredicted RBP4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 RPEL1Q2QD12 228 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 VWC2Q2TAL6 325 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 LGALSLQ3ZCW2 172 aaPredicted RBP4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 TM4SF20Q53R12 229 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 MORN5Q5VZ52 161 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 TOMM20LQ6UXN7 152 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 ADAMTSL5Q6ZMM2 481 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 CYP2G1PQ6ZSU1 146 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 TMUB2Q71RG4 321 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 Q8N1X5 172 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 LINC00482Q8N8I6 264 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 THAP8Q8NA92 274 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 BPIFCQ8NFQ6 507 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 OR51G1Q8NGK1 321 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 OR1L6Q8NGR2 347 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 TMEM190Q8WZ59 177 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 DPF1Q92782 380 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 CXorf58Q96LI9 332 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 SLC25A31Q9H0C2 315 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 CACFD1Q9UGQ2 172 aa4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 LSM4Q9Y4Z0 139 aaKnown RBP4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 PUS1Q9Y606 427 aaKnown RBP eCLIP4.94□□□□□ -1.62
DEPDC4-201ENST00000299185 TRBV7-1A0A0A6YYK4 115 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 ZNF320A2RRD8 509 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 AGPAT2O15120 278 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 NUPL2O15504 423 aaKnown RBP4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 CYB5BO43169 146 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 GGCTO75223 188 aaKnown RBP4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 SCAF4O95104 1147 aaKnown RBP4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 HSPB1P04792 205 aaKnown RBP4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 IL4P05112 153 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 SNRPCP09234 159 aaKnown RBP4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 LINC00869P0C866 280 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 PSG1P11464 419 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 GPX4P36969 197 aaPredicted RBP4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 NUP62P37198 522 aaPredicted RBP4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 NPBWR1P48145 328 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms