RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 PTPN13Q12923 2485 aa8.2□□□□□ -1.1
FOXN4-201ENST00000299162 MC5RP33032 325 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 PMCHL1Q16048 86 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 TEPPQ6URK8 271 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 MIR17HGQ75NE6 70 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 FLYWCH2Q96CP2 140 aaKnown RBP8.19□□□□□ -1.1
FOXN4-201ENST00000299162 BET1LQ9NYM9 111 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 WASHC3Q9Y3C0 194 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 TRAV30A0A087WSZ9 112 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 TRAV26-1A0A087WT03 109 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 SHISA9B4DS77 424 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 CNTFRP26992 372 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 OPRK1P41145 380 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 CAMPP49913 170 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 LINC00310P59036 64 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 PAFAH1B2P68402 229 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 MUC15Q8N387 334 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 NPVFQ9HCQ7 196 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 NGBQ9NPG2 151 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 TECRQ9NZ01 308 aaKnown RBP8.19□□□□□ -1.1
FOXN4-201ENST00000299162 LINC00312Q9Y6C7 94 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 TEX50A0A1B0GTY4 177 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 LCN2P80188 198 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 ODF1Q14990 250 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 PSG5Q15238 335 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 RNASEKQ6P5S7 137 aaKnown RBP8.19□□□□□ -1.1
FOXN4-201ENST00000299162 SLC25A48Q6ZT89 311 aaKnown RBP8.19□□□□□ -1.1
FOXN4-201ENST00000299162 TCTEX1D1Q8N7M0 179 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 NUP37Q8NFH4 326 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 OR4B1Q8NGF8 309 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 FAM222BQ8WU58 562 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 ONECUT1Q9UBC0 465 aa8.19□□□□□ -1.1
FOXN4-201ENST00000299162 H3BTX0 84 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 GPR6P46095 362 aaPredicted RBP8.18□□□□□ -1.1
FOXN4-201ENST00000299162 CRYBA4P53673 196 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 SSBP2P81877 361 aaPredicted RBP8.18□□□□□ -1.1
FOXN4-201ENST00000299162 CRYBG3Q68DQ2 2970 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 MMD2Q8IY49 270 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 C3orf79P0CE67 100 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 PPIAL4GP0DN37 164 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 SP5Q6BEB4 398 aaPredicted RBP8.18□□□□□ -1.1
FOXN4-201ENST00000299162 Q8N7P7 452 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 NAA38Q9BRA0 125 aaKnown RBP8.18□□□□□ -1.1
FOXN4-201ENST00000299162 RAB9BQ9NP90 201 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 TRAV5A0A0B4J249 113 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 K7ERU9 68 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 CORTO00230 105 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 HSBP1O75506 76 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 TOX4O94842 621 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 RAB31Q13636 194 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 PLGLAQ15195 96 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 EFNB3Q15768 340 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 SAMD13Q5VXD3 122 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 OR2D3Q8NGH3 330 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 OR1N2Q8NGR9 330 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 PMCHL2Q9BQD1 86 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 TIMM9Q9Y5J7 89 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 HILPDAQ9Y5L2 63 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 S4R3C0 116 aa8.18□□□□□ -1.1
FOXN4-201ENST00000299162 IGKV1OR2-108A0A075B7D4 117 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 RPL8P62917 257 aaKnown RBP8.17□□□□□ -1.1
FOXN4-201ENST00000299162 ZNF841Q6ZN19 808 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 TMEM186Q96B77 213 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 CHODLQ9H9P2 273 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 TMEM14BQ9NUH8 114 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 YTHDF2Q9Y5A9 579 aaKnown RBP8.17□□□□□ -1.1
FOXN4-201ENST00000299162 POLQO75417 2590 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 UPK2O00526 184 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 MOSP00540 346 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 IGLC2P0DOY2 106 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 IGLC3P0DOY3 106 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 LOXP28300 417 aaPredicted RBP8.17□□□□□ -1.1
FOXN4-201ENST00000299162 KIR2DS2P43631 304 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 ARF6P62330 175 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 TNXAQ16473 311 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 RPEL1Q2QD12 228 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 KIR3DL3Q8N743 410 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 C1orf159Q96HA4 380 aa8.17□□□□□ -1.1
FOXN4-201ENST00000299162 H0YJW9 148 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 GPX1P07203 203 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 PQLC2Q6ZP29 291 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 ZNF48Q96MX3 618 aaPredicted RBP8.16□□□□□ -1.1
FOXN4-201ENST00000299162 SSBP4Q9BWG4 385 aaPredicted RBP8.16□□□□□ -1.1
FOXN4-201ENST00000299162 PRNDQ9UKY0 176 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 TYMSP04818 313 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 CR1LQ2VPA4 569 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 TEX36Q5VZQ5 186 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 NPIPB3Q92617 1050 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 ADTRPQ96IZ2 230 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 SLC45A2Q9UMX9 530 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 ITPR1Q14643 2758 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 SH2D7A6NKC9 451 aaPredicted RBP8.16□□□□□ -1.1
FOXN4-201ENST00000299162 PDE6DO43924 150 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 VENTXO95231 258 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 ORM2P19652 201 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 CRYBB3P26998 211 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 TSPOP30536 169 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 TMPRSS3P57727 454 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 MPV17L2Q567V2 206 aa8.16□□□□□ -1.1
FOXN4-201ENST00000299162 NABP2Q9BQ15 211 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms